STRINGSTRING
JAG1 JAG1 PROX1 PROX1 PTF1A PTF1A KDM2B KDM2B CRB2 CRB2 LRP5 LRP5 RPGRIP1 RPGRIP1 FOXN4 FOXN4 LCTL LCTL STAT3 STAT3 FAT3 FAT3 BMP7 BMP7 GNAT2 GNAT2 SDK1 SDK1 STRA6 STRA6 NAGLU NAGLU RPGRIP1L RPGRIP1L EPHA2 EPHA2 BBS4 BBS4 TSKU TSKU ROM1 ROM1 LOC103069848 LOC103069848 PHACTR4 PHACTR4 MFN2 MFN2 RING1 RING1 BHLHE23 BHLHE23 CDON CDON FZD5 FZD5 MEIS1 MEIS1 MAN2A1 MAN2A1 HIPK1 HIPK1 LHX1 LHX1 TBX2 TBX2 FRS2 FRS2 TH TH FOXE3 FOXE3 CTNNB1 CTNNB1 CITED2 CITED2 GDF11 GDF11 PROM1 PROM1 NF1 NF1 TFAP2B TFAP2B KDR KDR LOC103079743 LOC103079743 AQP5 AQP5 RORB RORB AHI1 AHI1 LOC103074022 LOC103074022 BMP4 BMP4 TBC1D20 TBC1D20 CALB1 CALB1 ALDH1A3 ALDH1A3 MEGF11 MEGF11 IMPG2 IMPG2 DLL1 DLL1 NRL NRL IHH IHH PITX2 PITX2 LOC103068693 LOC103068693 ATF4 ATF4 COL8A2 COL8A2 SOX9 SOX9 SDK2 SDK2 SOX8 SOX8 LOC103088094 LOC103088094 MFSD2A MFSD2A COL8A1 COL8A1 YY1 YY1 NTRK2 NTRK2 THY1 THY1 FJX1 FJX1 TTC8 TTC8 IGFN1 IGFN1 VHL VHL ZEB1 ZEB1 HIF1A HIF1A PDE6C PDE6C PITX3 PITX3 HCN1 HCN1 CABP4 CABP4 DSCAM DSCAM LOC103071363 LOC103071363 GLI3 GLI3 LOC103069787 LOC103069787 RDH13 RDH13 RS1 RS1 HIPK2 HIPK2 TFAP2A TFAP2A FAT1 FAT1 THRB THRB AQP1 AQP1 BCAR3 BCAR3 IGSF22 IGSF22 NOTCH1 NOTCH1 EPHB2 EPHB2 NF2 NF2 LOC103081416 LOC103081416 USH1C USH1C PAX6 PAX6 TSPAN12 TSPAN12 RPE65 RPE65 LOC103088556 LOC103088556 CRB1 CRB1 LOC103076106 LOC103076106 PTPRM PTPRM EPHB1 EPHB1 NOTCH2 NOTCH2 CNTF CNTF TWIST1 TWIST1 MYPN MYPN TDRD7 TDRD7 VSX1 VSX1 FOXF2 FOXF2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
PROX1Prospero homeobox protein 1. (737 aa)
PTF1APancreas transcription factor 1 subunit alpha. (326 aa)
KDM2BLysine-specific demethylase 2B isoform X1. (1270 aa)
CRB2Protein crumbs homolog 2. (1281 aa)
LRP5Low-density lipoprotein receptor-related protein 5. (1451 aa)
RPGRIP1LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1. (1216 aa)
FOXN4Forkhead box protein N4. (518 aa)
LCTLLactase-like protein; Belongs to the glycosyl hydrolase 1 family. (566 aa)
STAT3Signal transducer and activator of transcription. (654 aa)
FAT3LOW QUALITY PROTEIN: protocadherin Fat 3. (4557 aa)
BMP7Bone morphogenetic protein 7 isoform X1. (431 aa)
GNAT2Guanine nucleotide-binding protein G(T) subunit alpha-2 isoform X1. (354 aa)
SDK1Protein sidekick-1. (1969 aa)
STRA6Stimulated by retinoic acid gene 6 protein homolog isoform X2. (675 aa)
NAGLUalpha-N-acetylglucosaminidase. (744 aa)
RPGRIP1LProtein fantom isoform X1. (1292 aa)
EPHA2Ephrin type-A receptor 2. (975 aa)
BBS4Bardet-Biedl syndrome 4 protein. (507 aa)
TSKUTsukushin. (367 aa)
ROM1Rod outer segment membrane protein 1. (351 aa)
LOC103069848Putative Bcl-2 homologous antagonist/killer 2-like. (211 aa)
PHACTR4Phosphatase and actin regulator. (816 aa)
MFN2Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
RING1E3 ubiquitin-protein ligase RING1. (406 aa)
BHLHE23Class E basic helix-loop-helix protein 23. (242 aa)
CDONCell adhesion molecule-related/down-regulated by oncogenes. (1250 aa)
FZD5Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family. (588 aa)
MEIS1Homeobox protein Meis2 isoform X1. (475 aa)
MAN2A1Alpha-mannosidase. (1145 aa)
HIPK1Homeodomain-interacting protein kinase 1. (1209 aa)
LHX1LIM/homeobox protein Lhx1. (406 aa)
TBX2T-box transcription factor TBX2. (875 aa)
FRS2Fibroblast growth factor receptor substrate 2. (508 aa)
THTyrosine 3-monooxygenase. (492 aa)
FOXE3Forkhead box protein E3. (317 aa)
CTNNB1Catenin beta-1 isoform X1. (781 aa)
CITED2Cbp/p300-interacting transactivator 2 isoform X1. (272 aa)
GDF11Growth/differentiation factor 11. (404 aa)
PROM1Prominin-1. (866 aa)
NF1Neurofibromin isoform X1. (2841 aa)
TFAP2BTranscription factor AP-2-beta isoform X1. (469 aa)
KDRVascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1356 aa)
LOC103079743Homeobox protein. (212 aa)
AQP5Aquaporin-5; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
RORBNuclear receptor ROR-beta. (547 aa)
AHI1Jouberin. (1245 aa)
LOC103074022Titin-like. (32000 aa)
BMP4Bone morphogenetic protein 4 isoform X1. (420 aa)
TBC1D20TBC1 domain family member 20. (403 aa)
CALB1LOW QUALITY PROTEIN: calbindin. (263 aa)
ALDH1A3Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family. (512 aa)
MEGF11Multiple epidermal growth factor-like domains protein 11. (1044 aa)
IMPG2Interphotoreceptor matrix proteoglycan 2. (1253 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (721 aa)
NRLLOW QUALITY PROTEIN: neural retina-specific leucine zipper protein. (237 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (410 aa)
PITX2Homeobox protein. (325 aa)
LOC103068693Lysine-specific demethylase 2B-like. (224 aa)
ATF4Cyclic AMP-dependent transcription factor ATF-4. (350 aa)
COL8A2Collagen alpha-2(VIII) chain. (705 aa)
SOX9Transcription factor SOX-9 isoform X1. (509 aa)
SDK2Protein sidekick-2. (2172 aa)
SOX8Transcription factor SOX-8. (463 aa)
LOC103088094Down syndrome cell adhesion molecule-like. (991 aa)
MFSD2AMajor facilitator superfamily domain-containing protein 2A isoform X1. (529 aa)
COL8A1Collagen alpha-1(VIII) chain isoform X1. (745 aa)
YY1Transcriptional repressor protein YY1. (412 aa)
NTRK2Tyrosine-protein kinase receptor. (366 aa)
THY1Thy-1 membrane glycoprotein. (161 aa)
FJX1Four-jointed box protein 1. (437 aa)
TTC8Tetratricopeptide repeat protein 8 isoform X1. (515 aa)
IGFN1LOW QUALITY PROTEIN: immunoglobulin-like and fibronectin type III domain containing 1. (2630 aa)
VHLLOW QUALITY PROTEIN: von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase. (219 aa)
ZEB1LOW QUALITY PROTEIN: zinc finger E-box binding homeobox 1. (1039 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X2. (822 aa)
PDE6CPhosphodiesterase. (860 aa)
PITX3Homeobox protein. (302 aa)
HCN1Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1. (876 aa)
CABP4Calcium-binding protein 4. (272 aa)
DSCAMDown syndrome cell adhesion molecule-like. (1226 aa)
LOC103071363LOW QUALITY PROTEIN: protein C10. (118 aa)
GLI3Transcriptional activator GLI3. (1590 aa)
LOC103069787BDNF/NT-3 growth factors receptor-like isoform X1. (553 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (334 aa)
RS1Retinoschisin. (224 aa)
HIPK2Homeodomain-interacting protein kinase 2 isoform X1. (1180 aa)
TFAP2ATranscription factor AP-2-alpha isoform X1. (446 aa)
FAT1Protocadherin Fat 1. (4587 aa)
THRBThyroid hormone receptor beta isoform X1. (476 aa)
AQP1Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
BCAR3Breast cancer anti-estrogen resistance protein 3 isoform X1. (825 aa)
IGSF22Immunoglobulin superfamily member 22. (1325 aa)
NOTCH1Neurogenic locus notch homolog protein 1. (2536 aa)
EPHB2Ephrin type-B receptor 2 isoform X1. (964 aa)
NF2LOW QUALITY PROTEIN: merlin. (592 aa)
LOC103081416Transcription factor Sp3-like. (1043 aa)
USH1CHarmonin isoform X1. (552 aa)
PAX6Paired box protein Pax-6 isoform X1. (436 aa)
TSPAN12Tetraspanin. (305 aa)
RPE65Retinoid isomerohydrolase. (533 aa)
LOC103088556Aldehyde dehydrogenase, mitochondrial-like; Belongs to the aldehyde dehydrogenase family. (468 aa)
CRB1Protein crumbs homolog 1 isoform X2. (1337 aa)
LOC103076106Non-histone chromosomal protein HMG-14-like. (100 aa)
PTPRMLOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase mu. (1477 aa)
EPHB1Ephrin type-B receptor 1. (984 aa)
NOTCH2Neurogenic locus notch homolog protein 2-like. (2471 aa)
CNTFCiliary neurotrophic factor. (200 aa)
TWIST1Twist-related protein 1 isoform X1. (204 aa)
MYPNMyopalladin isoform X1. (1320 aa)
TDRD7Tudor domain-containing protein 7 isoform X1. (1098 aa)
VSX1Visual system homeobox 1. (365 aa)
FOXF2Forkhead box protein F2. (443 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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