STRINGSTRING
PKD2L1 PKD2L1 MAGI1 MAGI1 CACNA1D CACNA1D PDLIM5 PDLIM5 PDLIM2 PDLIM2 PKD2 PKD2 ACTN1 ACTN1 MYPN MYPN LDB3 LDB3 MYOT MYOT LRRC10B LRRC10B PDLIM4 PDLIM4 LRRC10 LRRC10 SYNPO2 SYNPO2 PDLIM7 PDLIM7 PTPRT PTPRT RARA RARA PDLIM3 PDLIM3 XIRP2 XIRP2 CACNA1C CACNA1C KCNA5 KCNA5 NRAP NRAP PDLIM1 PDLIM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PKD2L1LOW QUALITY PROTEIN: polycystic kidney disease 2-like 1 protein. (804 aa)
MAGI1LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1. (1487 aa)
CACNA1DVoltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (2182 aa)
PDLIM5PDZ and LIM domain protein 5 isoform X1. (337 aa)
PDLIM2PDZ and LIM domain protein 2. (356 aa)
PKD2LOW QUALITY PROTEIN: polycystin-2. (963 aa)
ACTN1Alpha-actinin-1 isoform X1. (914 aa)
MYPNMyopalladin isoform X1. (1320 aa)
LDB3LIM domain-binding protein 3 isoform X1. (721 aa)
MYOTMyotilin isoform X1. (491 aa)
LRRC10BLeucine-rich repeat-containing protein 10B. (292 aa)
PDLIM4PDZ and LIM domain protein 4 isoform X1. (331 aa)
LRRC10Leucine-rich repeat-containing protein 10. (285 aa)
SYNPO2Synaptopodin-2 isoform X1. (1261 aa)
PDLIM7PDZ and LIM domain protein 7 isoform X1. (458 aa)
PTPRTReceptor-type tyrosine-protein phosphatase T. (1452 aa)
RARARetinoic acid receptor alpha isoform X1. (462 aa)
PDLIM3PDZ and LIM domain protein 3 isoform X1. (365 aa)
XIRP2Xin actin-binding repeat-containing protein 2-like isoform X1. (3545 aa)
CACNA1CVoltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (2112 aa)
KCNA5Potassium voltage-gated channel subfamily A member 5; Belongs to the potassium channel family. (595 aa)
NRAPLOW QUALITY PROTEIN: nebulin-related-anchoring protein. (1737 aa)
PDLIM1PDZ and LIM domain protein 1. (329 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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