STRINGSTRING
ALDH1A2 ALDH1A2 ALDH1A3 ALDH1A3 STRA6 STRA6 LOC103087126 LOC103087126 MKKS MKKS NIPBL NIPBL ARID5B ARID5B MAP2K1 MAP2K1 RARG RARG MAPK1 MAPK1 DLX5 DLX5 ZIC3 ZIC3 EP300 EP300 MAPK3 MAPK3 LEF1 LEF1 SGPL1 SGPL1 PDGFRA PDGFRA SCHIP1 SCHIP1 ZFAND5 ZFAND5 SRF SRF WNT5A WNT5A TGFB3 TGFB3 LOC103088556 LOC103088556 TIPARP TIPARP CRISPLD1 CRISPLD1 MMP2 MMP2 TGFB1 TGFB1 BBS4 BBS4 RAF1 RAF1 RRAS RRAS PAX9 PAX9 NOG NOG LOC103079709 LOC103079709 SCXB SCXB GRHL2 GRHL2 RAB3GAP1 RAB3GAP1 LOC103071971 LOC103071971 RARA RARA MSX1 MSX1 BRAF BRAF LOC103080655 LOC103080655 ANKRD11 ANKRD11 CSRNP1 CSRNP1 CRISPLD2 CRISPLD2 PTPN11 PTPN11 EDNRA EDNRA CHD7 CHD7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALDH1A2Retinal dehydrogenase 2 isoform X1; Belongs to the aldehyde dehydrogenase family. (518 aa)
ALDH1A3Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family. (512 aa)
STRA6Stimulated by retinoic acid gene 6 protein homolog isoform X2. (675 aa)
LOC103087126AT-rich interactive domain-containing protein 5B-like. (941 aa)
MKKSmcKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin. (570 aa)
NIPBLNipped-B protein. (2803 aa)
ARID5BAT-rich interactive domain-containing protein 5B. (327 aa)
MAP2K1Dual specificity mitogen-activated protein kinase kinase 1 isoform X1; Belongs to the protein kinase superfamily. (393 aa)
RARGRetinoic acid receptor gamma isoform X1. (458 aa)
MAPK1Mitogen-activated protein kinase 1 isoform X1. (263 aa)
DLX5Homeobox protein DLX-5. (289 aa)
ZIC3LOW QUALITY PROTEIN: zinc finger protein ZIC 3. (468 aa)
EP300Histone acetyltransferase p300. (2420 aa)
MAPK3Mitogen-activated protein kinase. (325 aa)
LEF1Lymphoid enhancer-binding factor 1 isoform X1. (399 aa)
SGPL1Sphingosine-1-phosphate lyase 1. (568 aa)
PDGFRAPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1089 aa)
SCHIP1Schwannomin-interacting protein 1 isoform X1. (560 aa)
ZFAND5AN1-type zinc finger protein 5 isoform X1. (213 aa)
SRFSerum response factor. (510 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
TGFB3Transforming growth factor beta-3. (456 aa)
LOC103088556Aldehyde dehydrogenase, mitochondrial-like; Belongs to the aldehyde dehydrogenase family. (468 aa)
TIPARPTCDD-inducible poly [ADP-ribose] polymerase isoform X1. (658 aa)
CRISPLD1Cysteine-rich secretory protein LCCL domain-containing 1 isoform X1. (500 aa)
MMP272 kDa type IV collagenase. (584 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (391 aa)
BBS4Bardet-Biedl syndrome 4 protein. (507 aa)
RAF1RAF proto-oncogene serine/threonine-protein kinase isoform X1. (648 aa)
RRASRas-related protein R-Ras. (218 aa)
PAX9Paired box protein Pax-9 isoform X1. (342 aa)
NOGNoggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
LOC103079709NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like. (539 aa)
SCXBBasic helix-loop-helix transcription factor scleraxis. (203 aa)
GRHL2Grainyhead-like protein 2 homolog. (605 aa)
RAB3GAP1Rab3 GTPase-activating protein catalytic subunit. (1210 aa)
LOC103071971Collagen alpha-1(I) chain-like. (1463 aa)
RARARetinoic acid receptor alpha isoform X1. (462 aa)
MSX1Homeobox protein MSX-1. (303 aa)
BRAFSerine/threonine-protein kinase B-raf. (763 aa)
LOC103080655chromodomain-helicase-DNA-binding protein 7-like. (414 aa)
ANKRD11Ankyrin repeat domain-containing protein 11. (2610 aa)
CSRNP1Cysteine/serine-rich nuclear protein 1. (590 aa)
CRISPLD2Cysteine-rich secretory protein LCCL domain-containing 2. (776 aa)
PTPN11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
EDNRAEndothelin-1 receptor isoform X2. (318 aa)
CHD7chromodomain-helicase-DNA-binding protein 7. (2305 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.