57 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TGFB3	Transforming growth factor beta-3. (456 aa)
	TF	Serotransferrin; Belongs to the transferrin family. (709 aa)
	SLC33A1	Acetyl-coenzyme A transporter 1 isoform X1. (550 aa)
	NODAL	Nodal homolog. (349 aa)
	LOC103073398	Left-right determination factor. (367 aa)
	LOC103077537	Bone morphogenetic protein 8B-like. (136 aa)
	BMP8B	Bone morphogenetic protein 8B. (403 aa)
	LOC103089261	Bone morphogenetic protein 8B-like. (403 aa)
	GDF10	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (440 aa)
	GDF2	Growth/differentiation factor 2. (431 aa)
	SUB1	Activated RNA polymerase II transcriptional coactivator p15. (127 aa)
	LOC103087908	Ankyrin repeat and BTB/POZ domain-containing protein BTBD11-like. (429 aa)
	LEFTY2	Left-right determination factor. (367 aa)
	LOC103079191	Bone morphogenetic protein 8B-like. (180 aa)
	HNF1A	Hepatocyte nuclear factor 1-alpha. (632 aa)
	SMAD6	Mothers against decapentaplegic homolog. (495 aa)
	GDF5	Growth/differentiation factor 5. (499 aa)
	BMP7	Bone morphogenetic protein 7 isoform X1. (431 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	SKI	Ski oncogene. (731 aa)
	BMP3	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (475 aa)
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)
	T	Brachyury protein isoform X1. (435 aa)
	GDF6	Growth/differentiation factor 6. (461 aa)
	BMP5	Bone morphogenetic protein 5 isoform X1. (454 aa)
	TGFB2	Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
	INHBB	Inhibin beta B chain. (511 aa)
	LOC103083289	Neutral cholesterol ester hydrolase 1-like. (262 aa)
	BMP2	Bone morphogenetic protein 2. (395 aa)
	HEXA	Beta-hexosaminidase subunit alpha. (450 aa)
	LOC103087515	Alpha-fetoprotein-like. (610 aa)
	GDF3	Growth/differentiation factor 3. (364 aa)
	SMAD1	Mothers against decapentaplegic homolog. (465 aa)
	INHBC	Inhibin beta C chain. (352 aa)
	HIPK2	Homeodomain-interacting protein kinase 2 isoform X1. (1180 aa)
	NUP93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (827 aa)
	SMAD2	Mothers against decapentaplegic homolog. (467 aa)
	GDF11	Growth/differentiation factor 11. (404 aa)
	INHBE	Inhibin beta E chain. (351 aa)
	CITED1	Cbp/p300-interacting transactivator 1 isoform X1. (221 aa)
	ATOH8	Protein atonal homolog 8. (317 aa)
	NCEH1	Neutral cholesterol ester hydrolase 1 isoform X1. (408 aa)
	SMAD7	Mothers against decapentaplegic homolog. (427 aa)
	ZMIZ1	Zinc finger MIZ domain-containing protein 1. (1065 aa)
	BMP6	Bone morphogenetic protein 6. (495 aa)
	BTBD11	Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X1. (701 aa)
	SMAD4	Mothers against decapentaplegic homolog. (553 aa)
	HNF4A	Hepatocyte nuclear factor 4-alpha isoform X1. (474 aa)
	SMAD9	Mothers against decapentaplegic homolog. (430 aa)
	BMP10	Bone morphogenetic protein 10. (421 aa)
	GDF7	Growth/differentiation factor 7. (457 aa)
	JADE2	Protein Jade-2 isoform X1. (849 aa)
	JUN	Transcription factor AP-1; Belongs to the bZIP family. (337 aa)
	GDF15	Growth/differentiation factor 15. (308 aa)
	RBM14	RNA-binding protein 14 isoform X1. (669 aa)
	SMAD5	Mothers against decapentaplegic homolog. (465 aa)
	GDF1	Embryonic growth/differentiation factor 1. (370 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP10	BMP4	A0A340XS48	A0A340W9C9	Bone morphogenetic protein 10.	Bone morphogenetic protein 4 isoform X1.	0.554
BMP10	BMP5	A0A340XS48	A0A340YIK5	Bone morphogenetic protein 10.	Bone morphogenetic protein 5 isoform X1.	0.562
BMP10	GDF2	A0A340XS48	A0A340X2F6	Bone morphogenetic protein 10.	Growth/differentiation factor 2.	0.840
BMP10	SMAD2	A0A340XS48	A0A340Y2L7	Bone morphogenetic protein 10.	Mothers against decapentaplegic homolog.	0.400
BMP10	SMAD3	A0A340XS48	A0A340WHM0	Bone morphogenetic protein 10.	Mothers against decapentaplegic homolog.	0.583
BMP10	SMAD4	A0A340XS48	A0A340XWQ2	Bone morphogenetic protein 10.	Mothers against decapentaplegic homolog.	0.485
BMP10	SMAD5	A0A340XS48	A0A340XJ60	Bone morphogenetic protein 10.	Mothers against decapentaplegic homolog.	0.525
BMP2	BMP4	A0A340YBD2	A0A340W9C9	Bone morphogenetic protein 2.	Bone morphogenetic protein 4 isoform X1.	0.927
BMP2	BMP5	A0A340YBD2	A0A340YIK5	Bone morphogenetic protein 2.	Bone morphogenetic protein 5 isoform X1.	0.546
BMP2	BMP6	A0A340YBD2	A0A340XYK1	Bone morphogenetic protein 2.	Bone morphogenetic protein 6.	0.953
BMP2	BMP7	A0A340YBD2	A0A340WIR5	Bone morphogenetic protein 2.	Bone morphogenetic protein 7 isoform X1.	0.655
BMP2	GDF5	A0A340YBD2	A0A340WJT7	Bone morphogenetic protein 2.	Growth/differentiation factor 5.	0.488
BMP2	SMAD1	A0A340YBD2	A0A340Y631	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.798
BMP2	SMAD2	A0A340YBD2	A0A340Y2L7	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.638
BMP2	SMAD3	A0A340YBD2	A0A340WHM0	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.593
BMP2	SMAD4	A0A340YBD2	A0A340XWQ2	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.824
BMP2	SMAD5	A0A340YBD2	A0A340XJ60	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.783
BMP2	SMAD6	A0A340YBD2	A0A340WME7	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.741
BMP2	SMAD7	A0A340YBD2	A0A340XZI6	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.711
BMP2	SMAD9	A0A340YBD2	A0A340XSM0	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.641