40 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AP3B1	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1087 aa)
	FGF8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (244 aa)
	SPRY1	Protein sprouty homolog 1 isoform X1. (319 aa)
	FOXF1	Forkhead box protein F1. (377 aa)
	PLOD3	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (739 aa)
	HOXA5	Homeobox protein Hox-A5. (270 aa)
	FOXA1	Hepatocyte nuclear factor 3-alpha. (466 aa)
	SPRY2	Protein sprouty homolog 2 isoform X1. (315 aa)
	CTNNB1	Catenin beta-1 isoform X1. (781 aa)
	GRHL2	Grainyhead-like protein 2 homolog. (605 aa)
	LOC103076742	Protein transport protein Sec24B-like. (242 aa)
	NOG	Noggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
	TBX2	T-box transcription factor TBX2. (875 aa)
	LOC103077930	Thyroid transcription factor 1-like isoform X2. (402 aa)
	DLG5	Disks large homolog 5; Belongs to the MAGUK family. (1921 aa)
	HHIP	Hedgehog-interacting protein-like isoform X1. (700 aa)
	ESRP2	Epithelial splicing regulatory protein 2. (717 aa)
	LIF	Leukemia inhibitory factor. (202 aa)
	FGF10	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (206 aa)
	CTSH	Pro-cathepsin H isoform X1; Belongs to the peptidase C1 family. (335 aa)
	LOC103079308	Uncharacterized protein LOC103079308. (289 aa)
	SRF	Serum response factor. (510 aa)
	SHH	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (454 aa)
	NODAL	Nodal homolog. (349 aa)
	CELSR1	Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family. (3319 aa)
	STK40	Serine/threonine-protein kinase 40 isoform X2. (441 aa)
	TCF21	LOW QUALITY PROTEIN: transcription factor 21. (179 aa)
	MAPK3	Mitogen-activated protein kinase. (325 aa)
	SOX9	Transcription factor SOX-9 isoform X1. (509 aa)
	EXT1	Exostosin-1; Belongs to the glycosyltransferase 47 family. (750 aa)
	RDH10	Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (341 aa)
	WNT2	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (360 aa)
	SEC24B	Protein transport protein Sec24B-like. (919 aa)
	CTSZ	Cathepsin Z; Belongs to the peptidase C1 family. (303 aa)
	MAPK1	Mitogen-activated protein kinase 1 isoform X1. (263 aa)
	MAP2K1	Dual specificity mitogen-activated protein kinase kinase 1 isoform X1; Belongs to the protein kinase superfamily. (393 aa)
	LOC103087231	Yorkie homolog isoform X1. (489 aa)
	YAP1	Yorkie homolog. (430 aa)
	KRAS	GTPase KRas. (188 aa)
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP4	CTNNB1	A0A340W9C9	A0A340XZA8	Bone morphogenetic protein 4 isoform X1.	Catenin beta-1 isoform X1.	0.625
BMP4	FGF10	A0A340W9C9	A0A340XK40	Bone morphogenetic protein 4 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.772
BMP4	FGF8	A0A340W9C9	A0A340YDC6	Bone morphogenetic protein 4 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.702
BMP4	FOXF1	A0A340W9C9	A0A340Y7U8	Bone morphogenetic protein 4 isoform X1.	Forkhead box protein F1.	0.489
BMP4	LIF	A0A340W9C9	A0A340XM91	Bone morphogenetic protein 4 isoform X1.	Leukemia inhibitory factor.	0.540
BMP4	LOC103079308	A0A340W9C9	A0A340XDR9	Bone morphogenetic protein 4 isoform X1.	Uncharacterized protein LOC103079308.	0.563
BMP4	NOG	A0A340W9C9	A0A340XUU4	Bone morphogenetic protein 4 isoform X1.	Noggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite.	0.995
BMP4	SHH	A0A340W9C9	A0A340X6Q8	Bone morphogenetic protein 4 isoform X1.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.563
BMP4	SOX9	A0A340W9C9	A0A340WYL2	Bone morphogenetic protein 4 isoform X1.	Transcription factor SOX-9 isoform X1.	0.607
BMP4	SPRY2	A0A340W9C9	A0A340XZP8	Bone morphogenetic protein 4 isoform X1.	Protein sprouty homolog 2 isoform X1.	0.439
CTNNB1	BMP4	A0A340XZA8	A0A340W9C9	Catenin beta-1 isoform X1.	Bone morphogenetic protein 4 isoform X1.	0.625
CTNNB1	DLG5	A0A340XZA8	A0A340XSJ3	Catenin beta-1 isoform X1.	Disks large homolog 5; Belongs to the MAGUK family.	0.475
CTNNB1	FGF10	A0A340XZA8	A0A340XK40	Catenin beta-1 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.548
CTNNB1	FGF8	A0A340XZA8	A0A340YDC6	Catenin beta-1 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.513
CTNNB1	KRAS	A0A340XZA8	A0A340WCQ7	Catenin beta-1 isoform X1.	GTPase KRas.	0.656
CTNNB1	LOC103079308	A0A340XZA8	A0A340XDR9	Catenin beta-1 isoform X1.	Uncharacterized protein LOC103079308.	0.603
CTNNB1	LOC103087231	A0A340XZA8	A0A340WJ71	Catenin beta-1 isoform X1.	Yorkie homolog isoform X1.	0.685
CTNNB1	MAPK1	A0A340XZA8	A0A340WNH5	Catenin beta-1 isoform X1.	Mitogen-activated protein kinase 1 isoform X1.	0.580
CTNNB1	MAPK3	A0A340XZA8	A0A340WYU9	Catenin beta-1 isoform X1.	Mitogen-activated protein kinase.	0.554
CTNNB1	NOG	A0A340XZA8	A0A340XUU4	Catenin beta-1 isoform X1.	Noggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite.	0.533