26 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BMPR1B	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
	BMP10	Bone morphogenetic protein 10. (421 aa)
	RUNX2	Runt-related transcription factor 2 isoform X1. (550 aa)
	CYR61	Protein CYR61. (382 aa)
	LOXL2	Lysyl oxidase homolog 2 isoform X1. (774 aa)
	WNT5A	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
	GDF2	Growth/differentiation factor 2. (431 aa)
	PKDCC	Protein kinase domain-containing protein, cytoplasmic. (498 aa)
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)
	SOX5	Transcription factor SOX-5 isoform X1. (750 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	SOX6	Transcription factor SOX-6 isoform X1. (842 aa)
	GDF6	Growth/differentiation factor 6. (461 aa)
	SOX9	Transcription factor SOX-9 isoform X1. (509 aa)
	BMP1	Metalloendopeptidase. (989 aa)
	ZBTB16	Zinc finger and BTB domain-containing protein 16 isoform X1. (673 aa)
	ZNF219	Zinc finger protein 219. (716 aa)
	LOC103073106	Uncharacterized protein LOC103073106. (173 aa)
	GDF5	Growth/differentiation factor 5. (499 aa)
	BMP2	Bone morphogenetic protein 2. (395 aa)
	GLI3	Transcriptional activator GLI3. (1590 aa)
	SMAD1	Mothers against decapentaplegic homolog. (465 aa)
	HOXA11	Homeobox protein Hox-A11. (317 aa)
	FGF18	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (207 aa)
	SMAD7	Mothers against decapentaplegic homolog. (427 aa)
	SCXB	Basic helix-loop-helix transcription factor scleraxis. (203 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP1	BMP2	A0A340WU88	A0A340YBD2	Metalloendopeptidase.	Bone morphogenetic protein 2.	0.431
BMP1	BMP4	A0A340WU88	A0A340W9C9	Metalloendopeptidase.	Bone morphogenetic protein 4 isoform X1.	0.500
BMP1	LOXL2	A0A340WU88	A0A340XBD0	Metalloendopeptidase.	Lysyl oxidase homolog 2 isoform X1.	0.448
BMP10	BMP4	A0A340XS48	A0A340W9C9	Bone morphogenetic protein 10.	Bone morphogenetic protein 4 isoform X1.	0.554
BMP10	BMPR1B	A0A340XS48	A0A340XSX9	Bone morphogenetic protein 10.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.512
BMP10	GDF2	A0A340XS48	A0A340X2F6	Bone morphogenetic protein 10.	Growth/differentiation factor 2.	0.840
BMP10	SMAD3	A0A340XS48	A0A340WHM0	Bone morphogenetic protein 10.	Mothers against decapentaplegic homolog.	0.583
BMP2	BMP1	A0A340YBD2	A0A340WU88	Bone morphogenetic protein 2.	Metalloendopeptidase.	0.431
BMP2	BMP4	A0A340YBD2	A0A340W9C9	Bone morphogenetic protein 2.	Bone morphogenetic protein 4 isoform X1.	0.927
BMP2	BMPR1B	A0A340YBD2	A0A340XSX9	Bone morphogenetic protein 2.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.989
BMP2	FGF18	A0A340YBD2	A0A340Y1S0	Bone morphogenetic protein 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.625
BMP2	GDF5	A0A340YBD2	A0A340WJT7	Bone morphogenetic protein 2.	Growth/differentiation factor 5.	0.488
BMP2	RUNX2	A0A340YBD2	A0A340XGJ9	Bone morphogenetic protein 2.	Runt-related transcription factor 2 isoform X1.	0.817
BMP2	SMAD1	A0A340YBD2	A0A340Y631	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.798
BMP2	SMAD3	A0A340YBD2	A0A340WHM0	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.593
BMP2	SMAD7	A0A340YBD2	A0A340XZI6	Bone morphogenetic protein 2.	Mothers against decapentaplegic homolog.	0.711
BMP2	SOX9	A0A340YBD2	A0A340WYL2	Bone morphogenetic protein 2.	Transcription factor SOX-9 isoform X1.	0.553
BMP4	BMP1	A0A340W9C9	A0A340WU88	Bone morphogenetic protein 4 isoform X1.	Metalloendopeptidase.	0.500
BMP4	BMP10	A0A340W9C9	A0A340XS48	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 10.	0.554
BMP4	BMP2	A0A340W9C9	A0A340YBD2	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 2.	0.927