STRINGSTRING
PGAM5 PGAM5 CYLD CYLD TNF TNF MLKL MLKL PPIF PPIF NLRP6 NLRP6 FADD FADD TLR3 TLR3 RIPK3 RIPK3 FAS FAS FASLG FASLG SPATA2 SPATA2 PYGL PYGL IPMK IPMK DNM1L DNM1L ITPK1 ITPK1 TRPM7 TRPM7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PGAM5Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1. (289 aa)
CYLDLOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family. (962 aa)
TNFTumor necrosis factor; Belongs to the tumor necrosis factor family. (233 aa)
MLKLLOW QUALITY PROTEIN: mixed lineage kinase domain-like protein. (428 aa)
PPIFPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (205 aa)
NLRP6LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 6. (1030 aa)
FADDFAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. (211 aa)
TLR3LOW QUALITY PROTEIN: toll-like receptor 3; Belongs to the Toll-like receptor family. (956 aa)
RIPK3LOW QUALITY PROTEIN: receptor-interacting serine-threonine kinase 3. (396 aa)
FASTumor necrosis factor receptor superfamily member 6. (342 aa)
FASLGTumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family. (262 aa)
SPATA2Spermatogenesis-associated protein 2. (520 aa)
PYGLAlpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (851 aa)
IPMKKinase; Belongs to the inositol phosphokinase (IPK) family. (416 aa)
DNM1LDynamin-1-like protein isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (749 aa)
ITPK1Inositol-tetrakisphosphate 1-kinase. (419 aa)
TRPM7Transient receptor potential cation channel subfamily M member 7. (1866 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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