STRINGSTRING
PRKDC PRKDC LOC103087926 LOC103087926 DCLRE1C DCLRE1C LIG4 LIG4 XRCC5 XRCC5 XRCC4 XRCC4 XRCC6 XRCC6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRKDCDNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family. (4131 aa)
LOC103087926Uncharacterized protein C9orf142 homolog. (177 aa)
DCLRE1CProtein artemis. (710 aa)
LIG4DNA ligase. (911 aa)
XRCC5X-ray repair cross-complementing protein 5. (733 aa)
XRCC4DNA repair protein XRCC4. (333 aa)
XRCC6X-ray repair cross-complementing protein 6 isoform X1. (609 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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