13 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103082395	Homeobox protein SIX4-like. (300 aa)
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)
	LOC103079308	Uncharacterized protein LOC103079308. (289 aa)
	BMP7	Bone morphogenetic protein 7 isoform X1. (431 aa)
	AMER1	APC membrane recruitment protein 1. (1119 aa)
	PKD2	LOW QUALITY PROTEIN: polycystin-2. (963 aa)
	TCF21	LOW QUALITY PROTEIN: transcription factor 21. (179 aa)
	SHH	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (454 aa)
	SIX2	Homeobox protein SIX2. (296 aa)
	SMAD4	Mothers against decapentaplegic homolog. (553 aa)
	OSR1	Protein odd-skipped-related 1. (267 aa)
	SIX4	Homeobox protein SIX4-like. (786 aa)
	SIX1	Homeobox protein SIX1. (284 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP4	BMP7	A0A340W9C9	A0A340WIR5	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 7 isoform X1.	0.790
BMP4	LOC103079308	A0A340W9C9	A0A340XDR9	Bone morphogenetic protein 4 isoform X1.	Uncharacterized protein LOC103079308.	0.563
BMP4	SHH	A0A340W9C9	A0A340X6Q8	Bone morphogenetic protein 4 isoform X1.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.563
BMP4	SMAD4	A0A340W9C9	A0A340XWQ2	Bone morphogenetic protein 4 isoform X1.	Mothers against decapentaplegic homolog.	0.865
BMP7	BMP4	A0A340WIR5	A0A340W9C9	Bone morphogenetic protein 7 isoform X1.	Bone morphogenetic protein 4 isoform X1.	0.790
BMP7	LOC103079308	A0A340WIR5	A0A340XDR9	Bone morphogenetic protein 7 isoform X1.	Uncharacterized protein LOC103079308.	0.462
BMP7	SHH	A0A340WIR5	A0A340X6Q8	Bone morphogenetic protein 7 isoform X1.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.462
BMP7	SIX2	A0A340WIR5	A0A340XEX4	Bone morphogenetic protein 7 isoform X1.	Homeobox protein SIX2.	0.438
BMP7	SMAD4	A0A340WIR5	A0A340XWQ2	Bone morphogenetic protein 7 isoform X1.	Mothers against decapentaplegic homolog.	0.675
LOC103079308	BMP4	A0A340XDR9	A0A340W9C9	Uncharacterized protein LOC103079308.	Bone morphogenetic protein 4 isoform X1.	0.563
LOC103079308	BMP7	A0A340XDR9	A0A340WIR5	Uncharacterized protein LOC103079308.	Bone morphogenetic protein 7 isoform X1.	0.462
SHH	BMP4	A0A340X6Q8	A0A340W9C9	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Bone morphogenetic protein 4 isoform X1.	0.563
SHH	BMP7	A0A340X6Q8	A0A340WIR5	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Bone morphogenetic protein 7 isoform X1.	0.462
SIX2	BMP7	A0A340XEX4	A0A340WIR5	Homeobox protein SIX2.	Bone morphogenetic protein 7 isoform X1.	0.438
SMAD4	BMP4	A0A340XWQ2	A0A340W9C9	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 4 isoform X1.	0.865
SMAD4	BMP7	A0A340XWQ2	A0A340WIR5	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 7 isoform X1.	0.675