STRINGSTRING
LOC103082395 LOC103082395 BMP4 BMP4 LOC103079308 LOC103079308 BMP7 BMP7 AMER1 AMER1 PKD2 PKD2 TCF21 TCF21 SHH SHH SIX2 SIX2 SMAD4 SMAD4 OSR1 OSR1 SIX4 SIX4 SIX1 SIX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103082395Homeobox protein SIX4-like. (300 aa)
BMP4Bone morphogenetic protein 4 isoform X1. (420 aa)
LOC103079308Uncharacterized protein LOC103079308. (289 aa)
BMP7Bone morphogenetic protein 7 isoform X1. (431 aa)
AMER1APC membrane recruitment protein 1. (1119 aa)
PKD2LOW QUALITY PROTEIN: polycystin-2. (963 aa)
TCF21LOW QUALITY PROTEIN: transcription factor 21. (179 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (454 aa)
SIX2Homeobox protein SIX2. (296 aa)
SMAD4Mothers against decapentaplegic homolog. (553 aa)
OSR1Protein odd-skipped-related 1. (267 aa)
SIX4Homeobox protein SIX4-like. (786 aa)
SIX1Homeobox protein SIX1. (284 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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