STRINGSTRING
SYNGAP1 SYNGAP1 LRRC4 LRRC4 SLITRK3 SLITRK3 MPP2 MPP2 SHANK3 SHANK3 DLG2 DLG2 TMEM108 TMEM108 NLGN1 NLGN1 DLG1 DLG1 RELN RELN ZDHHC12 ZDHHC12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYNGAP1ras/Rap GTPase-activating protein SynGAP. (1324 aa)
LRRC4Leucine-rich repeat-containing protein 4. (652 aa)
SLITRK3SLIT and NTRK-like protein 3 isoform X1. (979 aa)
MPP2MAGUK p55 subfamily member 2 isoform X1; Belongs to the MAGUK family. (569 aa)
SHANK3SH3 and multiple ankyrin repeat domains protein 3. (1586 aa)
DLG2Disks large homolog 2-like isoform X1. (905 aa)
TMEM108Transmembrane protein 108 isoform X1. (583 aa)
NLGN1Neuroligin-1 isoform X1. (863 aa)
DLG1Disks large homolog 1 isoform X1; Belongs to the MAGUK family. (927 aa)
RELNReelin isoform X1. (3460 aa)
ZDHHC12Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (266 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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