STRINGSTRING
NCOA1 NCOA1 NCOA3 NCOA3 ARNTL2 ARNTL2 NCOA2 NCOA2 KCNH4 KCNH4 HIF3A HIF3A PASK PASK KCNH2 KCNH2 KCNH8 KCNH8 PDE8A PDE8A ARNTL ARNTL SIM1 SIM1 PDE8B PDE8B SIM2 SIM2 HIF1A HIF1A AHRR AHRR KCNH5 KCNH5 ARNT2 ARNT2 PER2 PER2 KCNH6 KCNH6 NPAS1 NPAS1 EPAS1 EPAS1 PER1 PER1 NPAS4 NPAS4 ARNT ARNT AHR AHR KCNH7 KCNH7 NPAS2 NPAS2 KCNH3 KCNH3 KCNH1 KCNH1 PER3 PER3 NPAS3 NPAS3 CLOCK CLOCK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NCOA1Nuclear receptor coactivator. (1440 aa)
NCOA3Nuclear receptor coactivator. (1462 aa)
ARNTL2Aryl hydrocarbon receptor nuclear translocator-like protein 2. (612 aa)
NCOA2Nuclear receptor coactivator. (1464 aa)
KCNH4Potassium voltage-gated channel subfamily H member 4. (1016 aa)
HIF3AHypoxia-inducible factor 3-alpha. (669 aa)
PASKPAS domain-containing serine/threonine-protein kinase. (1324 aa)
KCNH2Potassium voltage-gated channel subfamily H member 2. (1198 aa)
KCNH8Potassium voltage-gated channel subfamily H member 8-like. (1106 aa)
PDE8APhosphodiesterase. (837 aa)
ARNTLAryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3. (632 aa)
SIM1Single-minded homolog 1. (766 aa)
PDE8BPhosphodiesterase. (885 aa)
SIM2LOW QUALITY PROTEIN: single-minded homolog 2. (679 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X2. (822 aa)
AHRRLOW QUALITY PROTEIN: aryl hydrocarbon receptor repressor. (691 aa)
KCNH5LOW QUALITY PROTEIN: potassium voltage-gated channel, subfamily H (Eag-related), member 5. (471 aa)
ARNT2Aryl hydrocarbon receptor nuclear translocator 2. (706 aa)
PER2Period circadian protein homolog 2. (1274 aa)
KCNH6LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily H member 6. (904 aa)
NPAS1Neuronal PAS domain-containing protein 1 isoform X1. (594 aa)
EPAS1Endothelial PAS domain-containing protein 1. (869 aa)
PER1Period circadian protein homolog 1. (1273 aa)
NPAS4Neuronal PAS domain-containing protein 4. (798 aa)
ARNTAryl hydrocarbon receptor nuclear translocator isoform X1. (790 aa)
AHRLOW QUALITY PROTEIN: aryl hydrocarbon receptor. (847 aa)
KCNH7Potassium voltage-gated channel subfamily H member 7. (1197 aa)
NPAS2Neuronal PAS domain-containing protein 2. (806 aa)
KCNH3Potassium voltage-gated channel subfamily H member 3. (1089 aa)
KCNH1Potassium voltage-gated channel subfamily H member 1 isoform X1. (988 aa)
PER3Period circadian protein homolog 3. (1145 aa)
NPAS3Neuronal PAS domain-containing protein 3-like. (786 aa)
CLOCKCircadian locomoter output cycles protein kaput isoform X1. (853 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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