24 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5	LOW QUALITY PROTEIN: complement C5. (1677 aa)
	PCOLCE2	Procollagen C-endopeptidase enhancer 2. (417 aa)
	AGRN	Agrin. (2143 aa)
	TIMP3	Metalloproteinase inhibitor 3. (211 aa)
	TIMP1	Metalloproteinase inhibitor 1. (257 aa)
	WFIKKN1	WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1. (549 aa)
	SFRP4	Secreted frizzled-related protein 4. (346 aa)
	TIMP4	Metalloproteinase inhibitor 4. (224 aa)
	FRZB	Secreted frizzled-related protein 3. (325 aa)
	NTN3	Netrin-3. (580 aa)
	LOC103081506	UPF0450 protein C17orf58 homolog. (97 aa)
	SFRP1	Secreted frizzled-related protein 1. (308 aa)
	SFRP5	Secreted frizzled-related protein 5. (315 aa)
	NTN1	Netrin-1 isoform X1. (604 aa)
	LOC103076380	Complement C3-like. (1659 aa)
	C4A	Complement C4-A. (1739 aa)
	ADAMTSL5	ADAMTS-like protein 5. (525 aa)
	C3	Complement C3. (1660 aa)
	LOC103070305	Metalloproteinase inhibitor 2-like. (220 aa)
	NTN5	Netrin-5. (489 aa)
	SFRP2	Secreted frizzled-related protein 2. (294 aa)
	WFIKKN2	WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2. (574 aa)
	NTN4	Netrin-4 isoform X1. (628 aa)
	PCOLCE	Procollagen C-endopeptidase enhancer 1. (455 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAMTSL5	NTN4	A0A340XN48	A0A340Y3L5	ADAMTS-like protein 5.	Netrin-4 isoform X1.	0.536
ADAMTSL5	NTN5	A0A340XN48	A0A340XVK2	ADAMTS-like protein 5.	Netrin-5.	0.533
ADAMTSL5	PCOLCE	A0A340XN48	A0A340Y5E5	ADAMTS-like protein 5.	Procollagen C-endopeptidase enhancer 1.	0.453
C3	C4A	A0A340XNP3	A0A340XK77	Complement C3.	Complement C4-A.	0.985
C3	C5	A0A340XNP3	A0A340WXF0	Complement C3.	LOW QUALITY PROTEIN: complement C5.	0.973
C4A	C3	A0A340XK77	A0A340XNP3	Complement C4-A.	Complement C3.	0.985
C4A	C5	A0A340XK77	A0A340WXF0	Complement C4-A.	LOW QUALITY PROTEIN: complement C5.	0.834
C5	C3	A0A340WXF0	A0A340XNP3	LOW QUALITY PROTEIN: complement C5.	Complement C3.	0.973
C5	C4A	A0A340WXF0	A0A340XK77	LOW QUALITY PROTEIN: complement C5.	Complement C4-A.	0.834
C5	LOC103076380	A0A340WXF0	A0A340XGT9	LOW QUALITY PROTEIN: complement C5.	Complement C3-like.	0.589
FRZB	SFRP2	A0A340X2T0	A0A340Y0F1	Secreted frizzled-related protein 3.	Secreted frizzled-related protein 2.	0.451
LOC103070305	TIMP1	A0A340XTJ5	A0A340WN11	Metalloproteinase inhibitor 2-like.	Metalloproteinase inhibitor 1.	0.637
LOC103070305	TIMP3	A0A340XTJ5	A0A340WIQ3	Metalloproteinase inhibitor 2-like.	Metalloproteinase inhibitor 3.	0.478
LOC103076380	C5	A0A340XGT9	A0A340WXF0	Complement C3-like.	LOW QUALITY PROTEIN: complement C5.	0.589
NTN4	ADAMTSL5	A0A340Y3L5	A0A340XN48	Netrin-4 isoform X1.	ADAMTS-like protein 5.	0.536
NTN5	ADAMTSL5	A0A340XVK2	A0A340XN48	Netrin-5.	ADAMTS-like protein 5.	0.533
PCOLCE	ADAMTSL5	A0A340Y5E5	A0A340XN48	Procollagen C-endopeptidase enhancer 1.	ADAMTS-like protein 5.	0.453
SFRP2	FRZB	A0A340Y0F1	A0A340X2T0	Secreted frizzled-related protein 2.	Secreted frizzled-related protein 3.	0.451
SFRP4	SFRP5	A0A340X1D6	A0A340XBA4	Secreted frizzled-related protein 4.	Secreted frizzled-related protein 5.	0.530
SFRP5	SFRP4	A0A340XBA4	A0A340X1D6	Secreted frizzled-related protein 5.	Secreted frizzled-related protein 4.	0.530