28 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYNJ2	Synaptojanin-2. (1475 aa)
	DNASE1L3	Deoxyribonuclease; Belongs to the DNase I family. (304 aa)
	CNOT6	CCR4-NOT transcription complex subunit 6. (519 aa)
	INPPL1	LOW QUALITY PROTEIN: phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2. (1264 aa)
	APEX1	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (320 aa)
	APEX2	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (514 aa)
	ANGEL1	Protein angel homolog 1. (667 aa)
	INPP5E	72 kDa inositol polyphosphate 5-phosphatase. (877 aa)
	CCRN4L	Nocturnin isoform X1. (428 aa)
	DNASE1L1	Deoxyribonuclease-1-like 1. (433 aa)
	CWH43	LOW QUALITY PROTEIN: PGAP2-interacting protein. (674 aa)
	TDP2	tyrosyl-DNA phosphodiesterase 2. (362 aa)
	CNOT6L	CCR4-NOT transcription complex subunit 6-like. (555 aa)
	INPP5K	Inositol polyphosphate 5-phosphatase K isoform X1. (450 aa)
	LOC103085051	Inositol polyphosphate 5-phosphatase OCRL-1-like. (230 aa)
	INPP5B	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase. (1208 aa)
	DNASE1L2	LOW QUALITY PROTEIN: deoxyribonuclease-1-like 2. (396 aa)
	EEPD1	Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (568 aa)
	INPP5D	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1. (1187 aa)
	SMPD2	Sphingomyelin phosphodiesterase 2. (423 aa)
	SYNJ1	Synaptojanin-1 isoform X1. (1600 aa)
	OCRL	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1. (904 aa)
	SMPD3	Sphingomyelin phosphodiesterase 3 isoform X1. (654 aa)
	ANGEL2	Protein angel homolog 2. (544 aa)
	LOC103085961	LOW QUALITY PROTEIN: 2',5'-phosphodiesterase 12-like. (611 aa)
	INPP5A	Type I inositol 1,4,5-trisphosphate 5-phosphatase. (412 aa)
	INPP5J	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1. (980 aa)
	DNASE1	Deoxyribonuclease; Belongs to the DNase I family. (284 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APEX1	APEX2	A0A340XQX3	A0A340XP73	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.912
APEX1	EEPD1	A0A340XQX3	A0A340WG88	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	Endonuclease/exonuclease/phosphatase family domain-containing protein 1.	0.626
APEX2	APEX1	A0A340XP73	A0A340XQX3	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.912
APEX2	TDP2	A0A340XP73	A0A340X659	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	tyrosyl-DNA phosphodiesterase 2.	0.439
CNOT6	CNOT6L	A0A340Y1N7	A0A340X651	CCR4-NOT transcription complex subunit 6.	CCR4-NOT transcription complex subunit 6-like.	0.974
CNOT6L	CNOT6	A0A340X651	A0A340Y1N7	CCR4-NOT transcription complex subunit 6-like.	CCR4-NOT transcription complex subunit 6.	0.974
EEPD1	APEX1	A0A340WG88	A0A340XQX3	Endonuclease/exonuclease/phosphatase family domain-containing protein 1.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.626
INPP5A	INPP5B	A0A340WY83	A0A340X1W8	Type I inositol 1,4,5-trisphosphate 5-phosphatase.	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	0.566
INPP5A	INPP5E	A0A340WY83	A0A340XJ89	Type I inositol 1,4,5-trisphosphate 5-phosphatase.	72 kDa inositol polyphosphate 5-phosphatase.	0.499
INPP5A	INPP5J	A0A340WY83	A0A340X030	Type I inositol 1,4,5-trisphosphate 5-phosphatase.	Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1.	0.945
INPP5A	INPP5K	A0A340WY83	A0A340X4S8	Type I inositol 1,4,5-trisphosphate 5-phosphatase.	Inositol polyphosphate 5-phosphatase K isoform X1.	0.938
INPP5B	INPP5A	A0A340X1W8	A0A340WY83	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	Type I inositol 1,4,5-trisphosphate 5-phosphatase.	0.566
INPP5B	INPP5E	A0A340X1W8	A0A340XJ89	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	72 kDa inositol polyphosphate 5-phosphatase.	0.911
INPP5B	LOC103085051	A0A340X1W8	A0A340X2Y3	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1-like.	0.453
INPP5B	OCRL	A0A340X1W8	A0A340WSG0	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	Inositol polyphosphate 5-phosphatase OCRL-1 isoform X1.	0.942
INPP5B	SYNJ1	A0A340X1W8	A0A340WK39	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	Synaptojanin-1 isoform X1.	0.940
INPP5B	SYNJ2	A0A340X1W8	A0A340WWF4	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	Synaptojanin-2.	0.941
INPP5D	INPPL1	A0A340W8L2	A0A340XUP3	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1.	LOW QUALITY PROTEIN: phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2.	0.938
INPP5E	INPP5A	A0A340XJ89	A0A340WY83	72 kDa inositol polyphosphate 5-phosphatase.	Type I inositol 1,4,5-trisphosphate 5-phosphatase.	0.499
INPP5E	INPP5B	A0A340XJ89	A0A340X1W8	72 kDa inositol polyphosphate 5-phosphatase.	LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase.	0.911