76 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RASGRP1	RAS guanyl-releasing protein 1 isoform X1. (797 aa)
	PSMD4	26S proteasome non-ATPase regulatory subunit 4. (377 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	NFKBIE	NF-kappa-B inhibitor epsilon. (426 aa)
	CALM3	Calmodulin isoform X2; Belongs to the calmodulin family. (149 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	PSMA1	Proteasome subunit alpha type. (263 aa)
	RELA	Transcription factor p65 isoform X1. (560 aa)
	PSMA7	Proteasome subunit alpha type. (255 aa)
	CSDE1	Cold shock domain-containing protein E1 isoform X1. (843 aa)
	UBA52	ubiquitin-60S ribosomal protein L40. (128 aa)
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (953 aa)
	WDR92	LOW QUALITY PROTEIN: WD repeat-containing protein 92. (355 aa)
	NRAS	GTPase NRas. (189 aa)
	NFKBIA	NF-kappa-B inhibitor alpha. (304 aa)
	PSMF1	Proteasome inhibitor PI31 subunit. (270 aa)
	NFKBIB	NF-kappa-B inhibitor beta. (353 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10 isoform X1. (226 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit isoform X1. (977 aa)
	PSMD13	26S proteasome non-ATPase regulatory subunit 13 isoform X1. (376 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3. (534 aa)
	REL	Proto-oncogene c-Rel. (594 aa)
	FKBP1A	Peptidylprolyl isomerase. (108 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	PSME4	Proteasome activator complex subunit 4. (1845 aa)
	FBXW11	F-box/WD repeat-containing protein 11 isoform X1. (542 aa)
	LOC103074541	LOW QUALITY PROTEIN: calmodulin-like protein 1-like; Belongs to the calmodulin family. (289 aa)
	HRAS	GTPase HRas isoform X1. (189 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	CARD11	Caspase recruitment domain-containing protein 11 isoform X2. (1147 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	CHUK	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (747 aa)
	LOC103072472	Proteasome activator complex subunit 2-like. (239 aa)
	PSMA4	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (311 aa)
	BTRC	F-box/WD repeat-containing protein 1A. (579 aa)
	PSMC1	26S protease regulatory subunit 4 isoform X1; Belongs to the AAA ATPase family. (440 aa)
	PSMD8	26S proteasome non-ATPase regulatory subunit 8. (351 aa)
	CALM1	Calmodulin isoform X1; Belongs to the calmodulin family. (150 aa)
	PSMC2	LOW QUALITY PROTEIN: 26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (477 aa)
	KRAS	GTPase KRas. (188 aa)
	PSME1	Proteasome activator complex subunit 1 isoform X1. (249 aa)
	PSMD6	26S proteasome non-ATPase regulatory subunit 6 isoform X1. (389 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMC6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
	PSME2	Proteasome activator complex subunit 2. (239 aa)
	LOC103091442	26S proteasome non-ATPase regulatory subunit 7-like. (322 aa)
	NFATC1	Nuclear factor of activated T-cells, cytoplasmic 1. (697 aa)
	PSME3	Proteasome activator complex subunit 3 isoform X1. (272 aa)
	NFAT5	Nuclear factor of activated T-cells 5 isoform X1. (1552 aa)
	PRKCB	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (673 aa)
	ERAS	GTPase ERas. (233 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMD9	26S proteasome non-ATPase regulatory subunit 9 isoform X1. (223 aa)
	LOC103083100	ubiquitin-60S ribosomal protein L40-like. (116 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB11	Proteasome subunit beta. (291 aa)
	MALT1	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1. (834 aa)
	PSMD5	26S proteasome non-ATPase regulatory subunit 5 isoform X1. (504 aa)
	RASGRP3	Ras guanyl-releasing protein 3 isoform X1. (740 aa)
	CCDC71L	Coiled-coil domain-containing protein 71L. (235 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (422 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (756 aa)
	PSMC3	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (423 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMC5	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (406 aa)
	BCL10	B-cell lymphoma/leukemia 10. (233 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	PSMB6	Proteasome subunit beta. (239 aa)
	PSMC4	26S protease regulatory subunit 6B isoform X1; Belongs to the AAA ATPase family. (418 aa)
	IKBKG	NF-kappa-B essential modulator isoform X1. (419 aa)
	LOC103082498	26S proteasome non-ATPase regulatory subunit 12-like isoform X1. (456 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (310 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL10	CARD11	A0A340X7H7	A0A340Y6W0	B-cell lymphoma/leukemia 10.	Caspase recruitment domain-containing protein 11 isoform X2.	0.997
BCL10	CHUK	A0A340X7H7	A0A340YD77	B-cell lymphoma/leukemia 10.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.978
BCL10	IKBKB	A0A340X7H7	A0A340X1S7	B-cell lymphoma/leukemia 10.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.977
BCL10	IKBKG	A0A340X7H7	A0A340XBQ7	B-cell lymphoma/leukemia 10.	NF-kappa-B essential modulator isoform X1.	0.991
BCL10	MALT1	A0A340X7H7	A0A340WRC1	B-cell lymphoma/leukemia 10.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1.	0.999
BCL10	NFKB1	A0A340X7H7	A0A340XX52	B-cell lymphoma/leukemia 10.	Nuclear factor NF-kappa-B p105 subunit isoform X1.	0.640
BCL10	NFKBIA	A0A340X7H7	A0A340XUE9	B-cell lymphoma/leukemia 10.	NF-kappa-B inhibitor alpha.	0.556
BCL10	PRKCB	A0A340X7H7	A0A340WMW7	B-cell lymphoma/leukemia 10.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.562
BCL10	REL	A0A340X7H7	A0A340XYF0	B-cell lymphoma/leukemia 10.	Proto-oncogene c-Rel.	0.409
BCL10	RELA	A0A340X7H7	A0A340XKW6	B-cell lymphoma/leukemia 10.	Transcription factor p65 isoform X1.	0.623
BTRC	CHUK	A0A340YEU0	A0A340YD77	F-box/WD repeat-containing protein 1A.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.594
BTRC	FBXW11	A0A340YEU0	A0A340Y2F0	F-box/WD repeat-containing protein 1A.	F-box/WD repeat-containing protein 11 isoform X1.	0.965
BTRC	IKBKB	A0A340YEU0	A0A340X1S7	F-box/WD repeat-containing protein 1A.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.617
BTRC	LOC103083100	A0A340YEU0	A0A340WP71	F-box/WD repeat-containing protein 1A.	ubiquitin-60S ribosomal protein L40-like.	0.618
BTRC	NFKB1	A0A340YEU0	A0A340XX52	F-box/WD repeat-containing protein 1A.	Nuclear factor NF-kappa-B p105 subunit isoform X1.	0.686
BTRC	NFKBIA	A0A340YEU0	A0A340XUE9	F-box/WD repeat-containing protein 1A.	NF-kappa-B inhibitor alpha.	0.972
BTRC	NFKBIB	A0A340YEU0	A0A340XX00	F-box/WD repeat-containing protein 1A.	NF-kappa-B inhibitor beta.	0.604
BTRC	NFKBIE	A0A340YEU0	A0A340XGJ4	F-box/WD repeat-containing protein 1A.	NF-kappa-B inhibitor epsilon.	0.408
BTRC	RELA	A0A340YEU0	A0A340XKW6	F-box/WD repeat-containing protein 1A.	Transcription factor p65 isoform X1.	0.456
BTRC	UBA52	A0A340YEU0	A0A340XP85	F-box/WD repeat-containing protein 1A.	ubiquitin-60S ribosomal protein L40.	0.618