STRINGSTRING
ULK1 ULK1 ATM ATM SRC SRC CHMP4B CHMP4B ATG9A ATG9A ATG16L1 ATG16L1 TUBA4A TUBA4A PRKAG3 PRKAG3 LOC103082790 LOC103082790 ATG14 ATG14 PRKAB2 PRKAB2 TM9SF1 TM9SF1 DYNC1I2 DYNC1I2 ZCCHC3 ZCCHC3 DYNLL1 DYNLL1 CSNK2A1 CSNK2A1 TUBB1 TUBB1 WIPI2 WIPI2 BECN1 BECN1 MDP1 MDP1 USP30 USP30 MAP1LC3A MAP1LC3A CHMP4A CHMP4A CFTR CFTR GSAP GSAP UBC UBC LAMTOR5 LAMTOR5 ATG12 ATG12 LOC103083100 LOC103083100 ATG10 ATG10 PRKAG1 PRKAG1 LOC103069618 LOC103069618 LOC103091095 LOC103091095 NBR1 NBR1 DYNC1I1 DYNC1I1 HDAC6 HDAC6 TUBE1 TUBE1 WDR45 WDR45 LOC103088880 LOC103088880 ATG7 ATG7 LOC103076438 LOC103076438 RRAGC RRAGC TUBA1C TUBA1C MTMR14 MTMR14 ATG101 ATG101 TOMM22 TOMM22 LOC103076433 LOC103076433 LOC103079668 LOC103079668 MTERFD1 MTERFD1 TUBA1B TUBA1B LOC103075538 LOC103075538 RHEBL1 RHEBL1 TUBA1A TUBA1A UVRAG UVRAG MLST8 MLST8 WIPI1 WIPI1 TSC1 TSC1 TOMM20 TOMM20 TOMM70A TOMM70A PARK7 PARK7 ATG13 ATG13 AMBRA1 AMBRA1 TSC2 TSC2 RRAGB RRAGB LOC103086172 LOC103086172 LOC103086727 LOC103086727 LOC103072950 LOC103072950 LOC103075565 LOC103075565 LOC103081682 LOC103081682 PLIN2 PLIN2 DYNC1H1 DYNC1H1 LOC103089543 LOC103089543 PGAM5 PGAM5 CETN1 CETN1 GABARAP GABARAP WDR45B WDR45B ATG3 ATG3 DYNC1LI2 DYNC1LI2 CHMP2A CHMP2A PARK2 PARK2 LOC103073687 LOC103073687 LAMTOR2 LAMTOR2 CHMP7 CHMP7 TUBB4B TUBB4B PINK1 PINK1 TOMM40 TOMM40 CSNK2B CSNK2B KXD1 KXD1 CRYBB3 CRYBB3 KIAA1671 KIAA1671 LY6G5B LY6G5B BECN1P1 BECN1P1 VDAC1 VDAC1 UBB UBB ULK2 ULK2 ATG4D ATG4D GABARAPL2 GABARAPL2 CHMP4C CHMP4C LAMTOR1 LAMTOR1 UBA52 UBA52 MFN2 MFN2 MTMR3 MTMR3 LOC103090066 LOC103090066 RB1CC1 RB1CC1 PIK3C3 PIK3C3 ATG4C ATG4C CHMP6 CHMP6 MTOR MTOR IFT88 IFT88 RPTOR RPTOR PIK3R4 PIK3R4 PRKAA2 PRKAA2 ATG4A ATG4A PRKAB1 PRKAB1 LAMTOR3 LAMTOR3 TXNDC11 TXNDC11 TUBB6 TUBB6 ARL13B ARL13B RPS27A RPS27A TUBAL3 TUBAL3 DYNLL2 DYNLL2 ATG5 ATG5 RRAGD RRAGD FNDC3A FNDC3A SQSTM1 SQSTM1 MFN1 MFN1 FNDC3B FNDC3B LOC103089565 LOC103089565 DYNC1LI1 DYNC1LI1 LOC103069326 LOC103069326 PEX5L PEX5L CSNK2A2 CSNK2A2 MAP1LC3B MAP1LC3B TOMM40L TOMM40L LOC103085022 LOC103085022 CHMP3 CHMP3 CHMP2B CHMP2B LOC103076597 LOC103076597 LAMTOR4 LAMTOR4 FUNDC2 FUNDC2 LOC103076330 LOC103076330 CETN3 CETN3 PRKAG2 PRKAG2 UBE2N UBE2N SLC38A9 SLC38A9 PEX5 PEX5 LOC103082376 LOC103082376 LOC103083735 LOC103083735 TUBA8 TUBA8 ATG9B ATG9B ATG4B ATG4B GABARAPL1 GABARAPL1 PRKAA1 PRKAA1 RHEB RHEB CRYGN CRYGN LOC103076627 LOC103076627 RRAGA RRAGA LOC103078288 LOC103078288
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ULK1Serine/threonine-protein kinase ULK1. (1055 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3058 aa)
SRCTyrosine-protein kinase. (548 aa)
CHMP4BCharged multivesicular body protein 4b. (224 aa)
ATG9AAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (870 aa)
ATG16L1Autophagy-related protein 16-1 isoform X1. (607 aa)
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (482 aa)
PRKAG35'-AMP-activated protein kinase subunit gamma-3 isoform X3. (482 aa)
LOC103082790Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (427 aa)
ATG14Beclin 1-associated autophagy-related key regulator. (414 aa)
PRKAB25'-AMP-activated protein kinase subunit beta-2. (272 aa)
TM9SF1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (633 aa)
DYNC1I2Cytoplasmic dynein 1 intermediate chain 2 isoform X1. (638 aa)
ZCCHC3Zinc finger CCHC domain-containing protein 3 isoform X1. (406 aa)
DYNLL1Dynein light chain. (89 aa)
CSNK2A1Casein kinase II subunit alpha isoform X1; Belongs to the protein kinase superfamily. (391 aa)
TUBB1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (480 aa)
WIPI2WD repeat domain phosphoinositide-interacting protein 2 isoform X1. (436 aa)
BECN1Beclin-1 isoform X1. (448 aa)
MDP1Magnesium-dependent phosphatase 1 isoform X1. (164 aa)
USP30Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (517 aa)
MAP1LC3AMicrotubule-associated proteins 1A/1B light chain 3A. (121 aa)
CHMP4ACharged multivesicular body protein 4a. (222 aa)
CFTRCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1482 aa)
GSAPGamma-secretase-activating protein. (854 aa)
UBCpolyubiquitin-C. (462 aa)
LAMTOR5Ragulator complex protein LAMTOR5. (91 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
LOC103083100ubiquitin-60S ribosomal protein L40-like. (116 aa)
ATG10Ubiquitin-like-conjugating enzyme ATG10. (234 aa)
PRKAG15'-AMP-activated protein kinase subunit gamma-1 isoform X2. (336 aa)
LOC103069618GTP-binding protein Rheb-like. (184 aa)
LOC103091095Protein Njmu-R1. (395 aa)
NBR1Next to BRCA1 gene 1 protein. (866 aa)
DYNC1I1Cytoplasmic dynein 1 intermediate chain 1 isoform X1. (645 aa)
HDAC6Histone deacetylase 6. (1142 aa)
TUBE1Tubulin epsilon chain; Belongs to the tubulin family. (475 aa)
WDR45WD repeat domain phosphoinositide-interacting protein 4 isoform X1. (361 aa)
LOC103088880Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (415 aa)
ATG7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (720 aa)
LOC103076438ubiquitin-40S ribosomal protein S27a-like. (155 aa)
RRAGCLOW QUALITY PROTEIN: ras-related GTP-binding protein C. (406 aa)
TUBA1CTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (414 aa)
MTMR14Myotubularin-related protein 14 isoform X1. (648 aa)
ATG101Autophagy-related protein 101. (218 aa)
TOMM22Mitochondrial import receptor subunit TOM22 homolog. (142 aa)
LOC103076433Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
LOC103079668Tubulin beta-2A chain-like. (168 aa)
MTERFD1mTERF domain-containing protein 1, mitochondrial. (414 aa)
TUBA1BTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
LOC103075538Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (454 aa)
RHEBL1GTPase RhebL1. (183 aa)
TUBA1ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
UVRAGUV radiation resistance-associated gene protein isoform X1. (699 aa)
MLST8Target of rapamycin complex subunit LST8 isoform X1. (326 aa)
WIPI1WD repeat domain phosphoinositide-interacting protein 1. (447 aa)
TSC1Hamartin isoform X1. (1170 aa)
TOMM20Mitochondrial import receptor subunit TOM20 homolog. (145 aa)
TOMM70AMitochondrial import receptor subunit TOM70. (609 aa)
PARK7Protein DJ-1. (189 aa)
ATG13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (551 aa)
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1 isoform X1. (1205 aa)
TSC2Tuberin. (1793 aa)
RRAGBRas-related GTP-binding protein B-like isoform X1. (374 aa)
LOC103086172Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC103086727Uncharacterized protein LOC103086727. (400 aa)
LOC103072950Uncharacterized protein LOC103072950. (442 aa)
LOC103075565FUN14 domain-containing protein 1-like. (155 aa)
LOC103081682Gamma-aminobutyric acid receptor-associated protein-like 1-like. (60 aa)
PLIN2Perilipin; Belongs to the perilipin family. (455 aa)
DYNC1H1Cytoplasmic dynein 1 heavy chain 1. (4620 aa)
LOC103089543Charged multivesicular body protein 7-like. (100 aa)
PGAM5Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1. (289 aa)
CETN1Centrin-1. (172 aa)
GABARAPGamma-aminobutyric acid receptor-associated protein. (117 aa)
WDR45BWD repeat domain phosphoinositide-interacting protein 3. (344 aa)
ATG3Autophagy-related protein 3. (314 aa)
DYNC1LI2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (492 aa)
CHMP2ACharged multivesicular body protein 2a. (222 aa)
PARK2RBR-type E3 ubiquitin transferase. (274 aa)
LOC103073687Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (415 aa)
LAMTOR2Ragulator complex protein LAMTOR2 isoform X1. (125 aa)
CHMP7Charged multivesicular body protein 7-like. (450 aa)
TUBB4BTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (571 aa)
TOMM40Mitochondrial import receptor subunit TOM40 homolog isoform X1. (361 aa)
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (249 aa)
KXD1kxDL motif-containing protein 1. (176 aa)
CRYBB3Beta-crystallin B3 isoform X1; Belongs to the beta/gamma-crystallin family. (211 aa)
KIAA1671Uncharacterized protein KIAA1671 homolog. (1811 aa)
LY6G5BLymphocyte antigen 6 complex locus protein G5b. (218 aa)
BECN1P1Beclin-2. (432 aa)
VDAC1Voltage-dependent anion-selective channel protein 1 isoform X1. (283 aa)
UBBpolyubiquitin-C isoform X1. (305 aa)
ULK2Serine/threonine-protein kinase ULK2. (952 aa)
ATG4DCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (471 aa)
GABARAPL2Gamma-aminobutyric acid receptor-associated protein-like 2. (117 aa)
CHMP4CCharged multivesicular body protein 4c. (237 aa)
LAMTOR1Ragulator complex protein LAMTOR1. (161 aa)
UBA52ubiquitin-60S ribosomal protein L40. (128 aa)
MFN2Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
MTMR3LOW QUALITY PROTEIN: myotubularin-related protein 3. (1205 aa)
LOC103090066LOW QUALITY PROTEIN: microtubule-associated proteins 1A/1B light chain 3C-like. (145 aa)
RB1CC1RB1-inducible coiled-coil protein 1. (1589 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (887 aa)
ATG4CCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (458 aa)
CHMP6Charged multivesicular body protein 6. (202 aa)
MTORSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2544 aa)
IFT88Intraflagellar transport protein 88 homolog. (825 aa)
RPTORRegulatory-associated protein of mTOR isoform X1. (1335 aa)
PIK3R4Phosphoinositide 3-kinase regulatory subunit 4. (1358 aa)
PRKAA2Non-specific serine/threonine protein kinase. (552 aa)
ATG4ACysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (398 aa)
PRKAB15'-AMP-activated protein kinase subunit beta-1. (270 aa)
LAMTOR3Ragulator complex protein LAMTOR3. (124 aa)
TXNDC11Thioredoxin domain-containing protein 11. (958 aa)
TUBB6Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (374 aa)
ARL13BADP-ribosylation factor-like protein 13B isoform X1. (430 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
TUBAL3Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (530 aa)
DYNLL2Dynein light chain. (89 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
RRAGDRas-related GTP-binding protein D. (396 aa)
FNDC3AFibronectin type-III domain-containing protein 3A isoform X1. (1198 aa)
SQSTM1Sequestosome-1. (440 aa)
MFN1Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (742 aa)
FNDC3BFibronectin type III domain-containing protein 3B. (1206 aa)
LOC103089565Uncharacterized protein LOC103089565. (301 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (524 aa)
LOC103069326Uncharacterized protein C6orf106 homolog. (215 aa)
PEX5LPEX5-related protein isoform X1. (650 aa)
CSNK2A2Casein kinase II subunit alpha. (213 aa)
MAP1LC3BMicrotubule-associated proteins 1A/1B light chain 3B isoform X1. (125 aa)
TOMM40LMitochondrial import receptor subunit TOM40B isoform X1. (339 aa)
LOC103085022Charged multivesicular body protein 7-like. (305 aa)
CHMP3Charged multivesicular body protein 3. (221 aa)
CHMP2BCharged multivesicular body protein 2b isoform X1. (213 aa)
LOC103076597ubiquitin-40S ribosomal protein S27a-like. (187 aa)
LAMTOR4Ragulator complex protein LAMTOR4. (99 aa)
FUNDC2FUN14 domain-containing protein 2. (189 aa)
LOC103076330FUN14 domain-containing protein 2-like. (257 aa)
CETN3Centrin-3. (167 aa)
PRKAG25'-AMP-activated protein kinase subunit gamma-2 isoform X1. (569 aa)
UBE2NUbiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
SLC38A9Putative sodium-coupled neutral amino acid transporter 9 isoform X1. (561 aa)
PEX5Peroxisomal targeting signal 1 receptor isoform X1. (656 aa)
LOC103082376Uncharacterized protein LOC103082376; Belongs to the tubulin family. (926 aa)
LOC103083735E3 ubiquitin-protein ligase parkin-like. (141 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
ATG9BAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (910 aa)
ATG4BCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (393 aa)
GABARAPL1Gamma-aminobutyric acid receptor-associated protein-like 1. (107 aa)
PRKAA1Non-specific serine/threonine protein kinase. (574 aa)
RHEBGTP-binding protein Rheb. (184 aa)
CRYGNGamma-crystallin N; Belongs to the beta/gamma-crystallin family. (183 aa)
LOC103076627Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (348 aa)
RRAGALOW QUALITY PROTEIN: Ras-related GTP binding A. (318 aa)
LOC103078288LOW QUALITY PROTEIN: uncharacterized protein C6orf106 homolog. (405 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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