STRINGSTRING
NCAN NCAN B3GAT3 B3GAT3 GPC3 GPC3 SDC4 SDC4 SDC1 SDC1 GPC5 GPC5 XYLT2 XYLT2 XYLT1 XYLT1 CSPG4 CSPG4 GPC1 GPC1 GPC2 GPC2 BGN BGN GPC6 GPC6 BCAN BCAN SDC2 SDC2 VCAN VCAN B3GAT1 B3GAT1 DCN DCN B3GALT6 B3GALT6 SDC3 SDC3 B3GAT2 B3GAT2 AGRN AGRN CSPG5 CSPG5 B4GALT7 B4GALT7 GPC4 GPC4 HSPG2 HSPG2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NCANNeurocan core protein. (1339 aa)
B3GAT3Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (335 aa)
GPC3Glypican-3 isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (580 aa)
SDC4Syndecan-4. (201 aa)
SDC1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (310 aa)
GPC5Glypican-5-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (518 aa)
XYLT2Xylosyltransferase 2. (864 aa)
XYLT1Xylosyltransferase 1-like. (835 aa)
CSPG4Chondroitin sulfate proteoglycan 4. (2315 aa)
GPC1Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (560 aa)
GPC2Glypican-2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (568 aa)
BGNBiglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (369 aa)
GPC6Glypican-6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (555 aa)
BCANBrevican core protein. (924 aa)
SDC2Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (201 aa)
VCANVersican core protein isoform X1. (3395 aa)
B3GAT1Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (337 aa)
DCNDecorin; May affect the rate of fibrils formation. (360 aa)
B3GALT6Hexosyltransferase. (324 aa)
SDC3Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (403 aa)
B3GAT2Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (325 aa)
AGRNAgrin. (2143 aa)
CSPG5LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 5. (572 aa)
B4GALT7Beta-1,4-galactosyltransferase 7. (338 aa)
GPC4Glypican-4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (557 aa)
HSPG2Basement membrane-specific heparan sulfate proteoglycan core protein. (4406 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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