10 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PCSK1	Neuroendocrine convertase 1; Belongs to the peptidase S8 family. (753 aa)
	POMC	Pro-opiomelanocortin. (261 aa)
	LHB	Lutropin subunit beta. (141 aa)
	LOC103074712	Follitropin subunit beta-like. (129 aa)
	INHBE	Inhibin beta E chain. (351 aa)
	TSHB	Thyrotropin subunit beta. (138 aa)
	INHA	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family. (364 aa)
	INHBA	LOW QUALITY PROTEIN: inhibin beta A chain. (430 aa)
	INHBC	Inhibin beta C chain. (352 aa)
	INHBB	Inhibin beta B chain. (511 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
INHA	INHBA	A0A340WFB1	A0A340Y4U1	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	LOW QUALITY PROTEIN: inhibin beta A chain.	0.846
INHA	INHBB	A0A340WFB1	A0A340YE71	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	Inhibin beta B chain.	0.847
INHA	INHBC	A0A340WFB1	A0A340Y5V8	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	Inhibin beta C chain.	0.623
INHA	INHBE	A0A340WFB1	A0A340Y242	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	Inhibin beta E chain.	0.581
INHA	LOC103074712	A0A340WFB1	A0A340XNV8	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	Follitropin subunit beta-like.	0.619
INHBA	INHA	A0A340Y4U1	A0A340WFB1	LOW QUALITY PROTEIN: inhibin beta A chain.	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	0.846
INHBA	INHBB	A0A340Y4U1	A0A340YE71	LOW QUALITY PROTEIN: inhibin beta A chain.	Inhibin beta B chain.	0.935
INHBA	INHBC	A0A340Y4U1	A0A340Y5V8	LOW QUALITY PROTEIN: inhibin beta A chain.	Inhibin beta C chain.	0.415
INHBA	LOC103074712	A0A340Y4U1	A0A340XNV8	LOW QUALITY PROTEIN: inhibin beta A chain.	Follitropin subunit beta-like.	0.496
INHBB	INHA	A0A340YE71	A0A340WFB1	Inhibin beta B chain.	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	0.847
INHBB	INHBA	A0A340YE71	A0A340Y4U1	Inhibin beta B chain.	LOW QUALITY PROTEIN: inhibin beta A chain.	0.935
INHBB	INHBE	A0A340YE71	A0A340Y242	Inhibin beta B chain.	Inhibin beta E chain.	0.428
INHBB	LOC103074712	A0A340YE71	A0A340XNV8	Inhibin beta B chain.	Follitropin subunit beta-like.	0.467
INHBC	INHA	A0A340Y5V8	A0A340WFB1	Inhibin beta C chain.	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	0.623
INHBC	INHBA	A0A340Y5V8	A0A340Y4U1	Inhibin beta C chain.	LOW QUALITY PROTEIN: inhibin beta A chain.	0.415
INHBE	INHA	A0A340Y242	A0A340WFB1	Inhibin beta E chain.	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	0.581
INHBE	INHBB	A0A340Y242	A0A340YE71	Inhibin beta E chain.	Inhibin beta B chain.	0.428
LHB	LOC103074712	A0A340XW69	A0A340XNV8	Lutropin subunit beta.	Follitropin subunit beta-like.	0.418
LHB	POMC	A0A340XW69	A0A340X6E8	Lutropin subunit beta.	Pro-opiomelanocortin.	0.486
LOC103074712	INHA	A0A340XNV8	A0A340WFB1	Follitropin subunit beta-like.	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.	0.619