STRINGSTRING
LOC103088445 LOC103088445 NUP85 NUP85 TDRD9 TDRD9 GPR133 GPR133 LOC103074048 LOC103074048 LOC103080676 LOC103080676 TNRC6B TNRC6B TDRD6 TDRD6 AGO1 AGO1 SEC13 SEC13 POLR2F POLR2F NUP50 NUP50 AGO4 AGO4 NUP214 NUP214 LOC103070167 LOC103070167 PRKRA PRKRA ASZ1 ASZ1 LOC103074978 LOC103074978 PIWIL2 PIWIL2 BCDIN3D BCDIN3D IPO8 IPO8 TPR TPR LOC103073911 LOC103073911 LOC103071989 LOC103071989 LOC103071706 LOC103071706 LOC103070340 LOC103070340 NUP37 NUP37 NUP88 NUP88 PIWIL4 PIWIL4 DROSHA DROSHA RAE1 RAE1 LOC103071163 LOC103071163 TNRC6A TNRC6A AAAS AAAS HENMT1 HENMT1 NUPL2 NUPL2 DICER1 DICER1 LOC103083434 LOC103083434 NUP155 NUP155 MYBL1 MYBL1 LOC103079983 LOC103079983 NUP133 NUP133 ELAC2 ELAC2 NUP35 NUP35 LOC103085427 LOC103085427 POLR2B POLR2B POLR2A POLR2A RAN RAN TSN TSN NUP54 NUP54 PIWIL1 PIWIL1 LOC103090400 LOC103090400 MAEL MAEL NUP160 NUP160 RANBP2 RANBP2 NUP210 NUP210 SEH1L SEH1L TDRKH TDRKH POLR2E POLR2E NUP210L NUP210L XPO5 XPO5 NUP43 NUP43 NUP153 NUP153 POLR2D POLR2D DGCR8 DGCR8 LOC103082863 LOC103082863 POLR2G POLR2G NUP62 NUP62 TNRC6C TNRC6C TDRD15 TDRD15 LOC103079884 LOC103079884 LOC103081255 LOC103081255 AGO2 AGO2 LOC103087776 LOC103087776 NUP98 NUP98 LOC103080427 LOC103080427 LOC103081704 LOC103081704 LOC103081970 LOC103081970 NUP107 NUP107 LOC103089645 LOC103089645 NUP205 NUP205 NUP93 NUP93 LOC103089049 LOC103089049 TSNAX TSNAX POLR2C POLR2C DDX4 DDX4 LOC103075696 LOC103075696 TDRD1 TDRD1 LOC103068403 LOC103068403 LOC103068676 LOC103068676 FKBP6 FKBP6 POM121C POM121C LOC103087252 LOC103087252 POLR2H POLR2H LOC103073367 LOC103073367 TDRD12 TDRD12 NDC1 NDC1 LOC103076354 LOC103076354 LOC103077708 LOC103077708 LOC103079101 LOC103079101 LOC103081667 LOC103081667 LOC103082925 LOC103082925 LOC103088169 LOC103088169 LOC103076894 LOC103076894 LOC103080928 LOC103080928 LOC103086798 LOC103086798 PIWIL3 PIWIL3 NUPL1 NUPL1 LOC103074679 LOC103074679 LOC103076624 LOC103076624 LOC103080666 LOC103080666 LOC103081931 LOC103081931 AGO3 AGO3 NUP188 NUP188 POLR2I POLR2I LOC103089763 LOC103089763 LOC103090650 LOC103090650 LOC103077443 LOC103077443 LOC103085965 LOC103085965 IPO7 IPO7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103088445Histone H2A; Belongs to the histone H2A family. (117 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
TDRD9Putative ATP-dependent RNA helicase TDRD9. (1379 aa)
GPR133Probable G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family. (874 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
LOC103080676Histone H2A; Belongs to the histone H2A family. (129 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X1. (1831 aa)
TDRD6Tudor domain-containing protein 6 isoform X1. (2100 aa)
AGO1Protein argonaute-1 isoform X1; Belongs to the argonaute family. (857 aa)
SEC13Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (172 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
NUP50LOW QUALITY PROTEIN: nuclear pore complex protein Nup50. (476 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (861 aa)
NUP214Nuclear pore complex protein Nup214. (2096 aa)
LOC103070167GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
PRKRAInterferon-inducible double-stranded RNA-dependent protein kinase activator A. (313 aa)
ASZ1Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1. (473 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PIWIL2Piwi-like protein 2 isoform X1; Belongs to the argonaute family. (971 aa)
BCDIN3Dpre-miRNA 5'-monophosphate methyltransferase. (294 aa)
IPO8Importin-8. (1037 aa)
TPRNucleoprotein TPR. (2357 aa)
LOC103073911Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071989Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071706Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103070340Histone H2B; Belongs to the histone H2B family. (126 aa)
NUP37Nucleoporin Nup37. (326 aa)
NUP88Nuclear pore complex protein Nup88. (743 aa)
PIWIL4Piwi-like protein 4 isoform X1; Belongs to the argonaute family. (852 aa)
DROSHARibonuclease 3 isoform X1. (1373 aa)
RAE1mRNA export factor. (368 aa)
LOC103071163Histone H2B; Belongs to the histone H2B family. (126 aa)
TNRC6ATrinucleotide repeat-containing gene 6A protein isoform X1. (1945 aa)
AAASAladin. (506 aa)
HENMT1Small RNA 2'-O-methyltransferase. (387 aa)
NUPL2Nucleoporin-like protein 2. (420 aa)
DICER1LOW QUALITY PROTEIN: endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1922 aa)
LOC103083434DNA-directed RNA polymerases I, II, and III subunit RPABC5-like. (81 aa)
NUP155Nuclear pore complex protein Nup155 isoform X1. (1391 aa)
MYBL1Myb-related protein A isoform X1. (750 aa)
LOC103079983Histone H2A; Belongs to the histone H2A family. (128 aa)
NUP133Nuclear pore complex protein Nup133. (1156 aa)
ELAC2Zinc phosphodiesterase ELAC protein 2 isoform X1. (817 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
LOC103085427Nuclear pore glycoprotein p62-like. (328 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
RANGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
TSNTranslin. (228 aa)
NUP54Nuclear pore complex protein Nup54 isoform X1. (510 aa)
PIWIL1Piwi-like protein 1; Belongs to the argonaute family. (861 aa)
LOC103090400Histone H2B; Belongs to the histone H2B family. (126 aa)
MAELProtein maelstrom homolog isoform X1. (434 aa)
NUP160Nuclear pore complex protein Nup160. (1402 aa)
RANBP2E3 SUMO-protein ligase RanBP2 isoform X1. (3093 aa)
NUP210Nuclear pore membrane glycoprotein 210-like. (646 aa)
SEH1LNucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family. (423 aa)
TDRKHTudor and KH domain-containing protein isoform X1. (561 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
NUP210LNuclear pore membrane glycoprotein 210-like isoform X1. (1887 aa)
XPO5Exportin-5. (1202 aa)
NUP43Nucleoporin Nup43. (380 aa)
NUP153Nuclear pore complex protein Nup153 isoform X1. (1476 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
DGCR8Microprocessor complex subunit DGCR8. (773 aa)
LOC103082863Nuclear pore membrane glycoprotein 210-like. (1246 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (199 aa)
NUP62Nuclear pore glycoprotein p62. (516 aa)
TNRC6CTrinucleotide repeat-containing gene 6C protein isoform X1. (1723 aa)
TDRD15LOW QUALITY PROTEIN: tudor domain-containing protein 15. (1967 aa)
LOC103079884Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103081255Histone H2B; Belongs to the histone H2B family. (142 aa)
AGO2LOW QUALITY PROTEIN: protein argonaute-2; Belongs to the argonaute family. (785 aa)
LOC103087776Sialidase-like. (251 aa)
NUP98Nuclear pore complex protein Nup98-Nup96. (1817 aa)
LOC103080427Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081704Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081970Histone H2A; Belongs to the histone H2A family. (129 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (927 aa)
LOC103089645Histone H2A; Belongs to the histone H2A family. (128 aa)
NUP205Nuclear pore complex protein Nup205. (2012 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (827 aa)
LOC103089049DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2732 aa)
TSNAXTranslin-associated protein X. (290 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (275 aa)
DDX4Probable ATP-dependent RNA helicase DDX4; Belongs to the DEAD box helicase family. (706 aa)
LOC103075696LOW QUALITY PROTEIN: protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (345 aa)
TDRD1Tudor domain-containing protein 1. (1046 aa)
LOC103068403Histone H2B type W-T-like; Belongs to the histone H2B family. (184 aa)
LOC103068676Histone H2B type W-T-like; Belongs to the histone H2B family. (177 aa)
FKBP6Peptidylprolyl isomerase. (325 aa)
POM121CNuclear envelope pore membrane protein POM 121C. (1219 aa)
LOC103087252DNA-directed RNA polymerase II subunit RPB11-like. (117 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC103073367Uncharacterized protein C20orf196 homolog. (225 aa)
TDRD12LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12. (1416 aa)
NDC1Nucleoporin NDC1 isoform X1. (675 aa)
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103077708Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103079101Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103082925Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103088169Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103076894Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080928Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103086798Histone H2B; Belongs to the histone H2B family. (126 aa)
PIWIL3LOW QUALITY PROTEIN: piwi-like RNA-mediated gene silencing 3. (312 aa)
NUPL1Nucleoporin p58/p45. (454 aa)
LOC103074679Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103076624Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080666Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081931Histone H3; Belongs to the histone H3 family. (150 aa)
AGO3Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (860 aa)
NUP188Nucleoporin NUP188 homolog. (1554 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
LOC103089763Uncharacterized protein LOC103089763. (411 aa)
LOC103090650Interferon-inducible double-stranded RNA-dependent protein kinase activator A-like. (313 aa)
LOC103077443Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103085965Histone H2B; Belongs to the histone H2B family. (126 aa)
IPO7Importin-7. (1038 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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