STRINGSTRING
LOC103080666 LOC103080666 LOC103068676 LOC103068676 TBPL2 TBPL2 BAZ2B BAZ2B TBP TBP MYO1G MYO1G DNMT3B DNMT3B LOC103079983 LOC103079983 POLR1B POLR1B ERCC6 ERCC6 LOC103083434 LOC103083434 KAT2A KAT2A EZH1 EZH1 ZNRD1 ZNRD1 GSK3B GSK3B MYO1H MYO1H EED EED LOC103071163 LOC103071163 TDG TDG EP300 EP300 MYO1C MYO1C TAF1C TAF1C MYO1D MYO1D POLR2F POLR2F PHF19 PHF19 SUV39H1 SUV39H1 SUZ12 SUZ12 SMARCA1 SMARCA1 LOC103074978 LOC103074978 DNMT3L DNMT3L MYBBP1A MYBBP1A TAF1D TAF1D LOC103073911 LOC103073911 LOC103071989 LOC103071989 LOC103086798 LOC103086798 KAT2B KAT2B LOC103074679 LOC103074679 LOC103076624 LOC103076624 LOC103081931 LOC103081931 LOC103070340 LOC103070340 LOC103071706 LOC103071706 LOC103068403 LOC103068403 LOC103085965 LOC103085965 LOC103077443 LOC103077443 LOC103089763 LOC103089763 LOC103088445 LOC103088445 RBBP4 RBBP4 EZH2 EZH2 MTF2 MTF2 MYO1A MYO1A TET2 TET2 BAZ2A BAZ2A MYO1B MYO1B POLR1A POLR1A LOC103089645 LOC103089645 SF3B1 SF3B1 LOC103081970 LOC103081970 LOC103081704 LOC103081704 LOC103080427 LOC103080427 LOC103081255 LOC103081255 LOC103079884 LOC103079884 SMARCA5 SMARCA5 SAP130 SAP130 UHRF1 UHRF1 DNMT1 DNMT1 JARID2 JARID2 DEK DEK ACTG1 ACTG1 TET3 TET3 PHF1 PHF1 GSK3A GSK3A POLR2E POLR2E CD3EAP CD3EAP RRP8 RRP8 LOC103089179 LOC103089179 TAF1A TAF1A SIRT1 SIRT1 TAF1B TAF1B BAZ1B BAZ1B POLR2H POLR2H LOC103076354 LOC103076354 LOC103077708 LOC103077708 LOC103079101 LOC103079101 LOC103081667 LOC103081667 LOC103082925 LOC103082925 LOC103088169 LOC103088169 MBD2 MBD2 LOC103076894 LOC103076894 LOC103080928 LOC103080928 POLR1C POLR1C LOC103090400 LOC103090400 LOC103076185 LOC103076185 TWISTNB TWISTNB LOC103077720 LOC103077720 RBBP7 RBBP7 TET1 TET1 DDX50 DDX50 DDX21 DDX21 POLR1E POLR1E SAP30BP SAP30BP LOC103077456 LOC103077456 LOC103074048 LOC103074048 LOC103080676 LOC103080676 AEBP2 AEBP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103080666Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103068676Histone H2B type W-T-like; Belongs to the histone H2B family. (177 aa)
TBPL2TATA box-binding protein-like protein 2. (343 aa)
BAZ2BBromodomain adjacent to zinc finger domain protein 2B isoform X1. (2170 aa)
TBPTATA-box-binding protein isoform X1. (329 aa)
MYO1GUnconventional myosin-Ig; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1013 aa)
DNMT3BDNA (Cytosine-5)-methyltransferase 3B isoform X2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (856 aa)
LOC103079983Histone H2A; Belongs to the histone H2A family. (128 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1153 aa)
ERCC6DNA excision repair protein ERCC-6. (1485 aa)
LOC103083434DNA-directed RNA polymerases I, II, and III subunit RPABC5-like. (81 aa)
KAT2AHistone acetyltransferase KAT2A isoform X1. (838 aa)
EZH1Histone-lysine N-methyltransferase EZH1. (747 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
GSK3BGlycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily. (433 aa)
MYO1HUnconventional myosin-Ih; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1022 aa)
EEDPolycomb protein EED isoform X1. (466 aa)
LOC103071163Histone H2B; Belongs to the histone H2B family. (126 aa)
TDGG/T mismatch-specific thymine DNA glycosylase isoform X1. (405 aa)
EP300Histone acetyltransferase p300. (2420 aa)
MYO1CUnconventional myosin-Ic isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1063 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1. (844 aa)
MYO1DUnconventional myosin-Id; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (955 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
PHF19PHD finger protein 19 isoform X1. (601 aa)
SUV39H1Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (424 aa)
SUZ12Polycomb protein SUZ12. (739 aa)
SMARCA1Probable global transcription activator SNF2L1 isoform X1. (1070 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
DNMT3LDNA (Cytosine-5)-methyltransferase 3-like. (597 aa)
MYBBP1AMyb-binding protein 1A. (1361 aa)
TAF1DTATA box-binding protein-associated factor RNA polymerase I subunit D. (272 aa)
LOC103073911Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071989Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103086798Histone H2B; Belongs to the histone H2B family. (126 aa)
KAT2BHistone acetyltransferase KAT2B. (735 aa)
LOC103074679Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103076624Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081931Histone H3; Belongs to the histone H3 family. (150 aa)
LOC103070340Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071706Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103068403Histone H2B type W-T-like; Belongs to the histone H2B family. (184 aa)
LOC103085965Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103077443Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103089763Uncharacterized protein LOC103089763. (411 aa)
LOC103088445Histone H2A; Belongs to the histone H2A family. (117 aa)
RBBP4Histone-binding protein RBBP4 isoform X1. (425 aa)
EZH2Histone-lysine N-methyltransferase EZH2 isoform X1. (751 aa)
MTF2Metal-response element-binding transcription factor 2 isoform X1. (593 aa)
MYO1AUnconventional myosin-Ia isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1043 aa)
TET2Methylcytosine dioxygenase TET2. (1997 aa)
BAZ2ABromodomain adjacent to zinc finger domain protein 2A. (1911 aa)
MYO1BLOW QUALITY PROTEIN: unconventional myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1141 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1713 aa)
LOC103089645Histone H2A; Belongs to the histone H2A family. (128 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1304 aa)
LOC103081970Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103081704Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080427Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081255Histone H2B; Belongs to the histone H2B family. (142 aa)
LOC103079884Histone H2A; Belongs to the histone H2A family. (130 aa)
SMARCA5SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1052 aa)
SAP130Histone deacetylase complex subunit SAP130 isoform X1. (1082 aa)
UHRF1E3 ubiquitin-protein ligase UHRF1. (822 aa)
DNMT1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1615 aa)
JARID2LOW QUALITY PROTEIN: protein Jumonji. (1237 aa)
DEKProtein DEK isoform X1. (376 aa)
ACTG1Actin, cytoplasmic 2. (375 aa)
TET3Methylcytosine dioxygenase TET3-like. (1799 aa)
PHF1PHD finger protein 1 isoform X1. (567 aa)
GSK3AGlycogen synthase kinase-3 alpha; Belongs to the protein kinase superfamily. (483 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (520 aa)
RRP8Ribosomal RNA-processing protein 8; Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone- modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and pr [...] (458 aa)
LOC103089179Methylcytosine dioxygenase TET3-like. (337 aa)
TAF1ATATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1. (482 aa)
SIRT1LOW QUALITY PROTEIN: NAD-dependent protein deacetylase sirtuin-1. (695 aa)
TAF1BTATA box-binding protein-associated factor RNA polymerase I subunit B. (590 aa)
BAZ1BTyrosine-protein kinase BAZ1B. (1342 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103077708Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103079101Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103082925Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103088169Histone H2B; Belongs to the histone H2B family. (127 aa)
MBD2methyl-CpG-binding domain protein 2. (354 aa)
LOC103076894Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080928Histone H2A; Belongs to the histone H2A family. (130 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
LOC103090400Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103076185Methylcytosine dioxygenase TET1-like. (1542 aa)
TWISTNBDNA-directed RNA polymerase I subunit RPA43. (329 aa)
LOC103077720DNA (Cytosine-5)-methyltransferase 3A-like isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (723 aa)
RBBP7Histone-binding protein RBBP7 isoform X1. (469 aa)
TET1Methylcytosine dioxygenase TET1-like. (579 aa)
DDX50ATP-dependent RNA helicase DDX50 isoform X1. (741 aa)
DDX21Nucleolar RNA helicase 2. (785 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49 isoform X1. (422 aa)
SAP30BPSAP30-binding protein isoform X1. (308 aa)
LOC103077456DNA (Cytosine-5)-methyltransferase 3A-like. (165 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
LOC103080676Histone H2A; Belongs to the histone H2A family. (129 aa)
AEBP2Zinc finger protein AEBP2 isoform X1. (420 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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