STRINGSTRING
COL4A4 COL4A4 F11R F11R COL16A1 COL16A1 JAM2 JAM2 ITGA5 ITGA5 COL4A3 COL4A3 LOC103088885 LOC103088885 ITGB1 ITGB1 ITGAV ITGAV HSPG2 HSPG2 LUM LUM TNC TNC FGB FGB JAM3 JAM3 ITGAX ITGAX LOC103068503 LOC103068503 COL6A1 COL6A1 IBSP IBSP CD47 CD47 ITGAD ITGAD COL6A3 COL6A3 SRL SRL COL8A2 COL8A2 COL18A1 COL18A1 VTN VTN COL6A2 COL6A2 ITGB6 ITGB6 ITGAM ITGAM ITGB2 ITGB2 ITGA2B ITGA2B ITGAL ITGAL COL4A1 COL4A1 LOC103069249 LOC103069249 FGA FGA ITGB7 ITGB7 CDH1 CDH1 SPP1 SPP1 VCAM1 VCAM1 COL9A1 COL9A1 ITGB5 ITGB5 CD44 CD44 MCMDC2 MCMDC2 ITGA11 ITGA11 CLN6 CLN6 COL5A2 COL5A2 COL4A5 COL4A5 COL2A1 COL2A1 LOC103071971 LOC103071971 ITGA3 ITGA3 COL3A1 COL3A1 ITGB8 ITGB8 ITGA1 ITGA1 COL5A1 COL5A1 COL8A1 COL8A1 COL9A2 COL9A2 ITGAE ITGAE COL4A2 COL4A2 ITGA2 ITGA2 FBN1 FBN1 ITGB3 ITGB3 PECAM1 PECAM1 FN1 FN1 ICAM2 ICAM2 BSG BSG COL5A3 COL5A3 ICAM1 ICAM1 ITGA10 ITGA10 ICAM3 ICAM3 THBS1 THBS1 COL9A3 COL9A3 COL6A6 COL6A6 ITGA9 ITGA9 ICAM4 ICAM4 MADCAM1 MADCAM1 ICAM5 ICAM5 ITGA8 ITGA8 COMP COMP ITGA4 ITGA4 COL6A5 COL6A5 COL4A6 COL4A6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL4A4Collagen alpha-4(IV) chain. (1686 aa)
F11RJunctional adhesion molecule A. (299 aa)
COL16A1Collagen alpha-1(XVI) chain. (1612 aa)
JAM2Junctional adhesion molecule B. (298 aa)
ITGA5Integrin alpha-5; Belongs to the integrin alpha chain family. (1053 aa)
COL4A3Collagen alpha-3(IV) chain. (1681 aa)
LOC103088885Collagen alpha-5(VI) chain-like. (2189 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (805 aa)
ITGAVIntegrin alpha-V; Belongs to the integrin alpha chain family. (1311 aa)
HSPG2Basement membrane-specific heparan sulfate proteoglycan core protein. (4406 aa)
LUMLumican. (340 aa)
TNCTenascin isoform X1. (2200 aa)
FGBFibrinogen beta chain isoform X1. (488 aa)
JAM3Junctional adhesion molecule C. (383 aa)
ITGAXIntegrin alpha-X; Belongs to the integrin alpha chain family. (1160 aa)
LOC103068503LOW QUALITY PROTEIN: fibrinogen gamma-B chain-like. (445 aa)
COL6A1Collagen alpha-1(VI) chain. (1150 aa)
IBSPBone sialoprotein 2. (317 aa)
CD47Leukocyte surface antigen CD47. (303 aa)
ITGADLOW QUALITY PROTEIN: integrin alpha-D; Belongs to the integrin alpha chain family. (1159 aa)
COL6A3LOW QUALITY PROTEIN: collagen alpha-3(VI) chain. (2962 aa)
SRLSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (473 aa)
COL8A2Collagen alpha-2(VIII) chain. (705 aa)
COL18A1Collagen alpha-1(XVIII) chain. (1513 aa)
VTNVitronectin isoform X1. (565 aa)
COL6A2Collagen alpha-2(VI) chain isoform X1. (1027 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (808 aa)
ITGAMIntegrin alpha-M; Belongs to the integrin alpha chain family. (1152 aa)
ITGB2Integrin beta. (769 aa)
ITGA2BIntegrin alpha-IIb; Belongs to the integrin alpha chain family. (1035 aa)
ITGALIntegrin alpha-L isoform X1; Belongs to the integrin alpha chain family. (1167 aa)
COL4A1Collagen alpha-1(IV) chain. (1668 aa)
LOC103069249Collagen alpha-2(I) chain-like isoform X3. (1370 aa)
FGAFibrinogen alpha chain. (605 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (780 aa)
CDH1Cadherin-1 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. (885 aa)
SPP1Osteopontin isoform X1. (296 aa)
VCAM1Vascular cell adhesion protein 1 isoform X1. (739 aa)
COL9A1Collagen alpha-1(IX) chain isoform X1. (925 aa)
ITGB5Integrin beta; Belongs to the integrin beta chain family. (800 aa)
CD44CD44 antigen isoform X1. (745 aa)
MCMDC2MCM domain-containing protein 2. (681 aa)
ITGA11Integrin alpha-11; Belongs to the integrin alpha chain family. (1188 aa)
CLN6Ceroid-lipofuscinosis neuronal protein 6 homolog isoform X1. (316 aa)
COL5A2Collagen alpha-2(V) chain. (1499 aa)
COL4A5Collagen alpha-5(IV) chain isoform X2. (1694 aa)
COL2A1Collagen alpha-1(II) chain isoform X1. (1487 aa)
LOC103071971Collagen alpha-1(I) chain-like. (1463 aa)
ITGA3Integrin alpha-3 isoform X1; Belongs to the integrin alpha chain family. (1068 aa)
COL3A1Collagen alpha-1(III) chain-like. (1462 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (767 aa)
ITGA1Integrin alpha-1 isoform X1; Belongs to the integrin alpha chain family. (1179 aa)
COL5A1Collagen alpha-1(V) chain isoform X1. (1841 aa)
COL8A1Collagen alpha-1(VIII) chain isoform X1. (745 aa)
COL9A2Collagen alpha-2(IX) chain. (691 aa)
ITGAEIntegrin alpha-E; Belongs to the integrin alpha chain family. (1351 aa)
COL4A2Collagen alpha-2(IV) chain. (1671 aa)
ITGA2Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
FBN1Fibrillin-1. (2776 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (784 aa)
PECAM1Platelet endothelial cell adhesion molecule. (779 aa)
FN1LOW QUALITY PROTEIN: fibronectin. (2483 aa)
ICAM2Intercellular adhesion molecule 2. (275 aa)
BSGBasigin isoform X1. (269 aa)
COL5A3Collagen alpha-3(V) chain isoform X1. (1744 aa)
ICAM1Intercellular adhesion molecule 1. (536 aa)
ITGA10Integrin alpha-10 isoform X1; Belongs to the integrin alpha chain family. (1167 aa)
ICAM3Intercellular adhesion molecule 3. (545 aa)
THBS1Thrombospondin-1. (1170 aa)
COL9A3Collagen alpha-3(IX) chain. (684 aa)
COL6A6LOW QUALITY PROTEIN: collagen alpha-6(VI) chain. (2282 aa)
ITGA9Integrin alpha-9; Belongs to the integrin alpha chain family. (1035 aa)
ICAM4Intercellular adhesion molecule 4. (272 aa)
MADCAM1Mucosal addressin cell adhesion molecule 1. (398 aa)
ICAM5Intercellular adhesion molecule 5. (924 aa)
ITGA8Integrin alpha-8; Belongs to the integrin alpha chain family. (1060 aa)
COMPCartilage oligomeric matrix protein isoform X1. (756 aa)
ITGA4Integrin alpha-4; Belongs to the integrin alpha chain family. (1033 aa)
COL6A5Collagen alpha-5(VI) chain. (440 aa)
COL4A6Collagen alpha-6(IV) chain. (1688 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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