STRINGSTRING
KDM5A KDM5A LOC103090224 LOC103090224 KDM5B KDM5B KDM5C KDM5C PHF8 PHF8 LOC103091599 LOC103091599 LOC103087126 LOC103087126 ARID5B ARID5B KDM2B KDM2B KDM4C KDM4C HR HR LOC103074978 LOC103074978 KDM2A KDM2A LOC103068693 LOC103068693 LOC103074048 LOC103074048 JMJD6 JMJD6 KDM6A KDM6A MINA MINA KDM6B KDM6B KDM1A KDM1A KDM4B KDM4B LOC103069841 LOC103069841 KDM3B KDM3B LOC103089763 LOC103089763 LOC103081931 LOC103081931 LOC103081667 LOC103081667 LOC103077708 LOC103077708 LOC103076354 LOC103076354 PHF2 PHF2 KDM1B KDM1B LOC103079146 LOC103079146 KDM3A KDM3A KDM7A KDM7A KDM4A KDM4A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KDM5ALysine-specific demethylase 5A. (1689 aa)
LOC103090224Lysine-specific demethylase 4D-like. (652 aa)
KDM5BLysine-specific demethylase 5B. (1352 aa)
KDM5CLysine-specific demethylase 5C isoform X1. (1558 aa)
PHF8Histone lysine demethylase PHF8 isoform X2. (1024 aa)
LOC103091599Lysine-specific demethylase 4D-like. (652 aa)
LOC103087126AT-rich interactive domain-containing protein 5B-like. (941 aa)
ARID5BAT-rich interactive domain-containing protein 5B. (327 aa)
KDM2BLysine-specific demethylase 2B isoform X1. (1270 aa)
KDM4CLysine-specific demethylase 4C-like isoform X2. (1053 aa)
HRProtein hairless isoform X1. (1183 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
KDM2ALysine-specific demethylase 2A isoform X1. (1162 aa)
LOC103068693Lysine-specific demethylase 2B-like. (224 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
JMJD6Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 isoform X1. (414 aa)
KDM6ALysine-specific demethylase 6A-like isoform X1. (1455 aa)
MINABifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (502 aa)
KDM6BLOW QUALITY PROTEIN: lysine-specific demethylase 6B. (1599 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (877 aa)
KDM4BLysine-specific demethylase 4B. (1088 aa)
LOC103069841Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (626 aa)
KDM3BLysine-specific demethylase 3B isoform X1. (1757 aa)
LOC103089763Uncharacterized protein LOC103089763. (411 aa)
LOC103081931Histone H3; Belongs to the histone H3 family. (150 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103077708Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PHF2Lysine-specific demethylase PHF2. (1104 aa)
KDM1BLysine-specific histone demethylase 1B. (590 aa)
LOC103079146Lysine-specific demethylase 4D-like. (521 aa)
KDM3ALysine-specific demethylase 3A isoform X1. (1322 aa)
KDM7ALysine-specific demethylase 7A. (849 aa)
KDM4ALOW QUALITY PROTEIN: lysine-specific demethylase 4A. (1069 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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