35 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MTERFD1	mTERF domain-containing protein 1, mitochondrial. (414 aa)
	LOC103083735	E3 ubiquitin-protein ligase parkin-like. (141 aa)
	LOC103076330	FUN14 domain-containing protein 2-like. (257 aa)
	FUNDC2	FUN14 domain-containing protein 2. (189 aa)
	TOMM40L	Mitochondrial import receptor subunit TOM40B isoform X1. (339 aa)
	MAP1LC3B	Microtubule-associated proteins 1A/1B light chain 3B isoform X1. (125 aa)
	CSNK2A2	Casein kinase II subunit alpha. (213 aa)
	LOC103089565	Uncharacterized protein LOC103089565. (301 aa)
	FNDC3B	Fibronectin type III domain-containing protein 3B. (1206 aa)
	MFN1	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (742 aa)
	SQSTM1	Sequestosome-1. (440 aa)
	FNDC3A	Fibronectin type-III domain-containing protein 3A isoform X1. (1198 aa)
	ATG5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	ULK1	Serine/threonine-protein kinase ULK1. (1055 aa)
	MFN2	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
	UBA52	ubiquitin-60S ribosomal protein L40. (128 aa)
	ULK2	Serine/threonine-protein kinase ULK2. (952 aa)
	VDAC1	Voltage-dependent anion-selective channel protein 1 isoform X1. (283 aa)
	LY6G5B	Lymphocyte antigen 6 complex locus protein G5b. (218 aa)
	CSNK2B	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (249 aa)
	TOMM40	Mitochondrial import receptor subunit TOM40 homolog isoform X1. (361 aa)
	PINK1	Serine/threonine-protein kinase PINK1, mitochondrial. (571 aa)
	PARK2	RBR-type E3 ubiquitin transferase. (274 aa)
	PGAM5	Serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1. (289 aa)
	LOC103075565	FUN14 domain-containing protein 1-like. (155 aa)
	TOMM70A	Mitochondrial import receptor subunit TOM70. (609 aa)
	TOMM20	Mitochondrial import receptor subunit TOM20 homolog. (145 aa)
	TOMM22	Mitochondrial import receptor subunit TOM22 homolog. (142 aa)
	LOC103083100	ubiquitin-60S ribosomal protein L40-like. (116 aa)
	ATG12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
	GSAP	Gamma-secretase-activating protein. (854 aa)
	MAP1LC3A	Microtubule-associated proteins 1A/1B light chain 3A. (121 aa)
	CSNK2A1	Casein kinase II subunit alpha isoform X1; Belongs to the protein kinase superfamily. (391 aa)
	ZCCHC3	Zinc finger CCHC domain-containing protein 3 isoform X1. (406 aa)
	SRC	Tyrosine-protein kinase. (548 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG12	ATG5	A0A340WP40	A0A340XXD4	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
ATG12	FUNDC2	A0A340WP40	A0A340Y7D4	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain-containing protein 2.	0.558
ATG12	GSAP	A0A340WP40	A0A340WN62	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Gamma-secretase-activating protein.	0.685
ATG12	LOC103075565	A0A340WP40	A0A340X626	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain-containing protein 1-like.	0.591
ATG12	LOC103076330	A0A340WP40	A0A340Y7E7	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	FUN14 domain-containing protein 2-like.	0.558
ATG12	MAP1LC3A	A0A340WP40	A0A340WL85	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated proteins 1A/1B light chain 3A.	0.819
ATG12	MAP1LC3B	A0A340WP40	A0A340Y453	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Microtubule-associated proteins 1A/1B light chain 3B isoform X1.	0.858
ATG12	MFN1	A0A340WP40	A0A340XZE8	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.649
ATG12	MFN2	A0A340WP40	A0A340XPB3	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.649
ATG12	PINK1	A0A340WP40	A0A340XGV3	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.477
ATG12	SQSTM1	A0A340WP40	A0A340XZA0	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Sequestosome-1.	0.820
ATG12	ULK1	A0A340WP40	A0A340XUR5	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Serine/threonine-protein kinase ULK1.	0.907
ATG12	ULK2	A0A340WP40	A0A340XMX4	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Serine/threonine-protein kinase ULK2.	0.905
ATG12	VDAC1	A0A340WP40	A0A340XMP5	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Voltage-dependent anion-selective channel protein 1 isoform X1.	0.623
ATG5	ATG12	A0A340XXD4	A0A340WP40	Autophagy protein 5; Involved in autophagic vesicle formation.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.999
ATG5	FUNDC2	A0A340XXD4	A0A340Y7D4	Autophagy protein 5; Involved in autophagic vesicle formation.	FUN14 domain-containing protein 2.	0.540
ATG5	GSAP	A0A340XXD4	A0A340WN62	Autophagy protein 5; Involved in autophagic vesicle formation.	Gamma-secretase-activating protein.	0.696
ATG5	LOC103075565	A0A340XXD4	A0A340X626	Autophagy protein 5; Involved in autophagic vesicle formation.	FUN14 domain-containing protein 1-like.	0.659
ATG5	LOC103076330	A0A340XXD4	A0A340Y7E7	Autophagy protein 5; Involved in autophagic vesicle formation.	FUN14 domain-containing protein 2-like.	0.540
ATG5	LOC103083735	A0A340XXD4	A0A340YBH1	Autophagy protein 5; Involved in autophagic vesicle formation.	E3 ubiquitin-protein ligase parkin-like.	0.451