STRINGSTRING
LOC103080666 LOC103080666 TAF1C TAF1C MYO1C MYO1C EP300 EP300 LOC103080676 LOC103080676 LOC103074048 LOC103074048 POLR1E POLR1E DDX21 DDX21 DDX50 DDX50 TWISTNB TWISTNB LOC103090400 LOC103090400 POLR1C POLR1C TAF1B TAF1B TAF1A TAF1A CD3EAP CD3EAP POLR2E POLR2E GSK3A GSK3A ACTG1 ACTG1 DEK DEK SMARCA5 SMARCA5 LOC103079884 LOC103079884 LOC103081255 LOC103081255 LOC103080427 LOC103080427 LOC103081704 LOC103081704 LOC103081970 LOC103081970 SF3B1 SF3B1 LOC103089645 LOC103089645 POLR1A POLR1A BAZ1B BAZ1B POLR2H POLR2H LOC103076354 LOC103076354 LOC103077708 LOC103077708 LOC103079101 LOC103079101 LOC103081667 LOC103081667 LOC103082925 LOC103082925 LOC103088169 LOC103088169 LOC103076894 LOC103076894 LOC103080928 LOC103080928 LOC103086798 LOC103086798 KAT2B KAT2B LOC103074679 LOC103074679 LOC103076624 LOC103076624 POLR2F POLR2F LOC103081931 LOC103081931 LOC103088445 LOC103088445 LOC103089763 LOC103089763 LOC103077443 LOC103077443 LOC103085965 LOC103085965 SMARCA1 SMARCA1 LOC103074978 LOC103074978 MYBBP1A MYBBP1A TAF1D TAF1D LOC103073911 LOC103073911 LOC103071989 LOC103071989 LOC103071706 LOC103071706 LOC103070340 LOC103070340 LOC103071163 LOC103071163 MYO1H MYO1H GSK3B GSK3B ZNRD1 ZNRD1 KAT2A KAT2A LOC103083434 LOC103083434 ERCC6 ERCC6 POLR1B POLR1B LOC103079983 LOC103079983 TBP TBP TBPL2 TBPL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103080666Histone H2B; Belongs to the histone H2B family. (126 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1. (844 aa)
MYO1CUnconventional myosin-Ic isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1063 aa)
EP300Histone acetyltransferase p300. (2420 aa)
LOC103080676Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49 isoform X1. (422 aa)
DDX21Nucleolar RNA helicase 2. (785 aa)
DDX50ATP-dependent RNA helicase DDX50 isoform X1. (741 aa)
TWISTNBDNA-directed RNA polymerase I subunit RPA43. (329 aa)
LOC103090400Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
TAF1BTATA box-binding protein-associated factor RNA polymerase I subunit B. (590 aa)
TAF1ATATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1. (482 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (520 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
GSK3AGlycogen synthase kinase-3 alpha; Belongs to the protein kinase superfamily. (483 aa)
ACTG1Actin, cytoplasmic 2. (375 aa)
DEKProtein DEK isoform X1. (376 aa)
SMARCA5SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1052 aa)
LOC103079884Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103081255Histone H2B; Belongs to the histone H2B family. (142 aa)
LOC103080427Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081704Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081970Histone H2A; Belongs to the histone H2A family. (129 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1304 aa)
LOC103089645Histone H2A; Belongs to the histone H2A family. (128 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1713 aa)
BAZ1BTyrosine-protein kinase BAZ1B. (1342 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103077708Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103079101Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103082925Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103088169Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103076894Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080928Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103086798Histone H2B; Belongs to the histone H2B family. (126 aa)
KAT2BHistone acetyltransferase KAT2B. (735 aa)
LOC103074679Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103076624Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
LOC103081931Histone H3; Belongs to the histone H3 family. (150 aa)
LOC103088445Histone H2A; Belongs to the histone H2A family. (117 aa)
LOC103089763Uncharacterized protein LOC103089763. (411 aa)
LOC103077443Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103085965Histone H2B; Belongs to the histone H2B family. (126 aa)
SMARCA1Probable global transcription activator SNF2L1 isoform X1. (1070 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
MYBBP1AMyb-binding protein 1A. (1361 aa)
TAF1DTATA box-binding protein-associated factor RNA polymerase I subunit D. (272 aa)
LOC103073911Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071989Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071706Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103070340Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071163Histone H2B; Belongs to the histone H2B family. (126 aa)
MYO1HUnconventional myosin-Ih; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1022 aa)
GSK3BGlycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily. (433 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
KAT2AHistone acetyltransferase KAT2A isoform X1. (838 aa)
LOC103083434DNA-directed RNA polymerases I, II, and III subunit RPABC5-like. (81 aa)
ERCC6DNA excision repair protein ERCC-6. (1485 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1153 aa)
LOC103079983Histone H2A; Belongs to the histone H2A family. (128 aa)
TBPTATA-box-binding protein isoform X1. (329 aa)
TBPL2TATA box-binding protein-like protein 2. (343 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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