49 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KAT2B	Histone acetyltransferase KAT2B. (735 aa)
	LOC103090666	Histone H2A; Belongs to the histone H2A family. (130 aa)
	BARD1	BRCA1-associated RING domain protein 1 isoform X1. (776 aa)
	EP300	Histone acetyltransferase p300. (2420 aa)
	LOC103076438	ubiquitin-40S ribosomal protein S27a-like. (155 aa)
	BRCA1	Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (727 aa)
	LOC103071706	Histone H2A; Belongs to the histone H2A family. (130 aa)
	LOC103083100	ubiquitin-60S ribosomal protein L40-like. (116 aa)
	UBC	polyubiquitin-C. (462 aa)
	LOC103072537	Histone H2A; Belongs to the histone H2A family. (130 aa)
	FAM175A	BRCA1-A complex subunit Abraxas. (410 aa)
	LOC103078828	Histone H2A; Belongs to the histone H2A family. (130 aa)
	LOC103077443	Histone H2A; Belongs to the histone H2A family. (130 aa)
	LOC103087068	Histone H2A; Belongs to the histone H2A family. (128 aa)
	LOC103072950	Uncharacterized protein LOC103072950. (442 aa)
	LOC103071198	Histone H2A; Belongs to the histone H2A family. (144 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (310 aa)
	STAMBP	STAM-binding protein isoform X2. (424 aa)
	STAM	Signal transducing adapter molecule 1. (507 aa)
	KXD1	kxDL motif-containing protein 1. (176 aa)
	NLRP10	LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 10. (698 aa)
	MPND	MPN domain-containing protein. (463 aa)
	BABAM1	BRISC and BRCA1-A complex member 1 isoform X1. (330 aa)
	UIMC1	BRCA1-A complex subunit RAP80 isoform X1. (726 aa)
	UBB	polyubiquitin-C isoform X1. (305 aa)
	UBA52	ubiquitin-60S ribosomal protein L40. (128 aa)
	LOC103081962	NACHT, LRR and PYD domains-containing protein 3-like. (1037 aa)
	LOC103082240	Histone H2A; Belongs to the histone H2A family. (130 aa)
	LOC103084799	Lys-63-specific deubiquitinase BRCC36-like. (139 aa)
	LOC103079884	Histone H2A; Belongs to the histone H2A family. (130 aa)
	MYSM1	Histone H2A deubiquitinase MYSM1. (833 aa)
	LOC103081970	Histone H2A; Belongs to the histone H2A family. (129 aa)
	RPS27A	ubiquitin-40S ribosomal protein S27a. (156 aa)
	LOC103086246	Histone H2A; Belongs to the histone H2A family. (131 aa)
	LOC103080928	Histone H2A; Belongs to the histone H2A family. (130 aa)
	STAMBPL1	AMSH-like protease isoform X1. (436 aa)
	NLRP14	LOW QUALITY PROTEIN: NLR family, pyrin domain containing 14. (851 aa)
	BRE	BRCA1-A complex subunit BRE isoform X1. (407 aa)
	LOC103090510	NACHT, LRR and PYD domains-containing protein 12-like. (1050 aa)
	BRCC3	Lys-63-specific deubiquitinase BRCC36. (183 aa)
	RNH1	Ribonuclease inhibitor. (456 aa)
	FAM175B	BRISC complex subunit Abro1. (424 aa)
	LOC103073470	Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1156 aa)
	LOC103076597	ubiquitin-40S ribosomal protein S27a-like. (187 aa)
	NLRP2	NACHT, LRR and PYD domains-containing protein 2-like. (912 aa)
	ANKRD11	Ankyrin repeat domain-containing protein 11. (2610 aa)
	LOC103083197	Histone H2A; Belongs to the histone H2A family. (130 aa)
	LOC103088445	Histone H2A; Belongs to the histone H2A family. (117 aa)
	LOC103077170	Histone H2A; Belongs to the histone H2A family. (130 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD11	BABAM1	A0A340Y7W7	A0A340XLR0	Ankyrin repeat domain-containing protein 11.	BRISC and BRCA1-A complex member 1 isoform X1.	0.559
ANKRD11	BRCA1	A0A340Y7W7	A0A340WSA7	Ankyrin repeat domain-containing protein 11.	Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...]	0.800
ANKRD11	BRCC3	A0A340Y7W7	A0A340Y269	Ankyrin repeat domain-containing protein 11.	Lys-63-specific deubiquitinase BRCC36.	0.511
ANKRD11	BRE	A0A340Y7W7	A0A340YFV3	Ankyrin repeat domain-containing protein 11.	BRCA1-A complex subunit BRE isoform X1.	0.576
ANKRD11	FAM175A	A0A340Y7W7	A0A340WJ60	Ankyrin repeat domain-containing protein 11.	BRCA1-A complex subunit Abraxas.	0.844
ANKRD11	LOC103072950	A0A340Y7W7	A0A340X5A7	Ankyrin repeat domain-containing protein 11.	Uncharacterized protein LOC103072950.	0.478
ANKRD11	LOC103073470	A0A340Y7W7	A0A340Y5J9	Ankyrin repeat domain-containing protein 11.	Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...]	0.800
ANKRD11	LOC103076438	A0A340Y7W7	A0A340WWK2	Ankyrin repeat domain-containing protein 11.	ubiquitin-40S ribosomal protein S27a-like.	0.478
ANKRD11	LOC103076597	A0A340Y7W7	A0A340Y697	Ankyrin repeat domain-containing protein 11.	ubiquitin-40S ribosomal protein S27a-like.	0.478
ANKRD11	LOC103083100	A0A340Y7W7	A0A340WP71	Ankyrin repeat domain-containing protein 11.	ubiquitin-60S ribosomal protein L40-like.	0.566
ANKRD11	LOC103084799	A0A340Y7W7	A0A340XRS1	Ankyrin repeat domain-containing protein 11.	Lys-63-specific deubiquitinase BRCC36-like.	0.511
ANKRD11	RPS27A	A0A340Y7W7	A0A340XWL7	Ankyrin repeat domain-containing protein 11.	ubiquitin-40S ribosomal protein S27a.	0.478
ANKRD11	UBA52	A0A340Y7W7	A0A340XP85	Ankyrin repeat domain-containing protein 11.	ubiquitin-60S ribosomal protein L40.	0.566
ANKRD11	UBB	A0A340Y7W7	A0A340XMW2	Ankyrin repeat domain-containing protein 11.	polyubiquitin-C isoform X1.	0.523
ANKRD11	UBC	A0A340Y7W7	A0A340WNW1	Ankyrin repeat domain-containing protein 11.	polyubiquitin-C.	0.523
ANKRD11	UIMC1	A0A340Y7W7	A0A340XP71	Ankyrin repeat domain-containing protein 11.	BRCA1-A complex subunit RAP80 isoform X1.	0.590
BABAM1	ANKRD11	A0A340XLR0	A0A340Y7W7	BRISC and BRCA1-A complex member 1 isoform X1.	Ankyrin repeat domain-containing protein 11.	0.559
BABAM1	BARD1	A0A340XLR0	A0A340X4I6	BRISC and BRCA1-A complex member 1 isoform X1.	BRCA1-associated RING domain protein 1 isoform X1.	0.901
BABAM1	BRCA1	A0A340XLR0	A0A340WSA7	BRISC and BRCA1-A complex member 1 isoform X1.	Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...]	0.949
BABAM1	BRCC3	A0A340XLR0	A0A340Y269	BRISC and BRCA1-A complex member 1 isoform X1.	Lys-63-specific deubiquitinase BRCC36.	0.998