STRINGSTRING
MAPK3 MAPK3 TBPL2 TBPL2 TBP TBP DMTF1 DMTF1 LOC103079983 LOC103079983 POLR1B POLR1B MTA3 MTA3 ERCC6 ERCC6 LOC103083434 LOC103083434 GTF2H3 GTF2H3 ZNRD1 ZNRD1 CCNH CCNH LOC103071163 LOC103071163 GTF2H4 GTF2H4 LOC103070340 LOC103070340 LOC103071706 LOC103071706 LOC103071989 LOC103071989 LOC103073911 LOC103073911 LOC103085965 LOC103085965 LOC103077443 LOC103077443 MNAT1 MNAT1 LOC103089763 LOC103089763 TAF1D TAF1D LOC103074978 LOC103074978 HDAC2 HDAC2 TTF1 TTF1 CHD5 CHD5 TBPL1 TBPL1 GTF2H5 GTF2H5 POLR2F POLR2F AIRE AIRE TAF1C TAF1C MTA1 MTA1 LOC103080676 LOC103080676 LOC103074048 LOC103074048 POLR1E POLR1E GTF2H2 GTF2H2 CDK7 CDK7 RBBP7 RBBP7 UBTF UBTF TWISTNB TWISTNB CHD3 CHD3 LOC103090400 LOC103090400 POLR1C POLR1C LOC103088445 LOC103088445 LOC103081931 LOC103081931 LOC103080666 LOC103080666 LOC103076624 LOC103076624 LOC103074679 LOC103074679 MBD3L1 MBD3L1 LOC103086798 LOC103086798 LOC103080928 LOC103080928 LOC103076894 LOC103076894 CHD4 CHD4 MBD2 MBD2 LOC103088169 LOC103088169 LOC103082925 LOC103082925 LOC103081667 LOC103081667 LOC103079101 LOC103079101 LOC103077708 LOC103077708 LOC103076354 LOC103076354 POLR2H POLR2H LOC103068676 LOC103068676 LOC103068403 LOC103068403 TAF1B TAF1B TAF1A TAF1A GATAD2B GATAD2B CD3EAP CD3EAP MBD3 MBD3 POLR2E POLR2E ERCC2 ERCC2 LOC103080427 LOC103080427 LOC103081704 LOC103081704 LOC103081970 LOC103081970 LOC103070584 LOC103070584 LOC103089645 LOC103089645 CBX3 CBX3 POLR1A POLR1A GTF2H1 GTF2H1 HDAC1 HDAC1 RRN3 RRN3 RBBP4 RBBP4 GATAD2A GATAD2A ERCC3 ERCC3 EHMT2 EHMT2 LOC103088198 LOC103088198 MTA2 MTA2 ACRC ACRC LOC103079884 LOC103079884 LOC103081255 LOC103081255
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAPK3Mitogen-activated protein kinase. (325 aa)
TBPL2TATA box-binding protein-like protein 2. (343 aa)
TBPTATA-box-binding protein isoform X1. (329 aa)
DMTF1cyclin-D-binding Myb-like transcription factor 1 isoform X1. (762 aa)
LOC103079983Histone H2A; Belongs to the histone H2A family. (128 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1153 aa)
MTA3Metastasis-associated protein MTA3. (606 aa)
ERCC6DNA excision repair protein ERCC-6. (1485 aa)
LOC103083434DNA-directed RNA polymerases I, II, and III subunit RPABC5-like. (81 aa)
GTF2H3General transcription factor IIH subunit 3 isoform X1. (309 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
CCNHcyclin-H isoform X1; Belongs to the cyclin family. (330 aa)
LOC103071163Histone H2B; Belongs to the histone H2B family. (126 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
LOC103070340Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071706Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103071989Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103073911Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103085965Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103077443Histone H2A; Belongs to the histone H2A family. (130 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
LOC103089763Uncharacterized protein LOC103089763. (411 aa)
TAF1DTATA box-binding protein-associated factor RNA polymerase I subunit D. (272 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
HDAC2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (488 aa)
TTF1Transcription termination factor 1. (762 aa)
CHD5chromodomain-helicase-DNA-binding protein 5. (1817 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
AIREAutoimmune regulator. (562 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1. (844 aa)
MTA1Metastasis-associated protein MTA1. (1152 aa)
LOC103080676Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49 isoform X1. (422 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CDK7Cyclin-dependent kinase 7 isoform X1; Belongs to the protein kinase superfamily. (353 aa)
RBBP7Histone-binding protein RBBP7 isoform X1. (469 aa)
UBTFNucleolar transcription factor 1 isoform X1. (757 aa)
TWISTNBDNA-directed RNA polymerase I subunit RPA43. (329 aa)
CHD3chromodomain-helicase-DNA-binding protein 3. (1986 aa)
LOC103090400Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
LOC103088445Histone H2A; Belongs to the histone H2A family. (117 aa)
LOC103081931Histone H3; Belongs to the histone H3 family. (150 aa)
LOC103080666Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103076624Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103074679Histone H2B; Belongs to the histone H2B family. (127 aa)
MBD3L1LOW QUALITY PROTEIN: methyl-CpG binding domain protein 3-like 1. (192 aa)
LOC103086798Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080928Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103076894Histone H2B; Belongs to the histone H2B family. (126 aa)
CHD4chromodomain-helicase-DNA-binding protein 4. (1912 aa)
MBD2methyl-CpG-binding domain protein 2. (354 aa)
LOC103088169Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103082925Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103079101Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103077708Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC103068676Histone H2B type W-T-like; Belongs to the histone H2B family. (177 aa)
LOC103068403Histone H2B type W-T-like; Belongs to the histone H2B family. (184 aa)
TAF1BTATA box-binding protein-associated factor RNA polymerase I subunit B. (590 aa)
TAF1ATATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1. (482 aa)
GATAD2BTranscriptional repressor p66-beta. (592 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (520 aa)
MBD3methyl-CpG-binding domain protein 3 isoform X1. (289 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit isoform X1. (760 aa)
LOC103080427Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081704Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081970Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103070584UPF0722 protein C11orf88 homolog. (168 aa)
LOC103089645Histone H2A; Belongs to the histone H2A family. (128 aa)
CBX3Chromobox protein homolog 3. (183 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1713 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (538 aa)
RRN3RNA polymerase I-specific transcription initiation factor RRN3. (651 aa)
RBBP4Histone-binding protein RBBP4 isoform X1. (425 aa)
GATAD2ATranscriptional repressor p66-alpha. (639 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (782 aa)
EHMT2Histone-lysine N-methyltransferase EHMT2-like isoform X1. (1209 aa)
LOC103088198Histone-lysine N-methyltransferase EHMT2-like. (210 aa)
MTA2Metastasis-associated protein MTA2. (666 aa)
ACRCAcidic repeat-containing protein. (477 aa)
LOC103079884Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103081255Histone H2B; Belongs to the histone H2B family. (142 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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