STRINGSTRING
LOC103076354 LOC103076354 LOC103090400 LOC103090400 MBD4 MBD4 TERF2IP TERF2IP LOC103079884 LOC103079884 LOC103081255 LOC103081255 LOC103080427 LOC103080427 LOC103081704 LOC103081704 LOC103081970 LOC103081970 LOC103089645 LOC103089645 SMUG1 SMUG1 LOC103068403 LOC103068403 LOC103085965 LOC103085965 LOC103077443 LOC103077443 LOC103088445 LOC103088445 LOC103080666 LOC103080666 LOC103076624 LOC103076624 LOC103074679 LOC103074679 LOC103086798 LOC103086798 LOC103080928 LOC103080928 LOC103076894 LOC103076894 NEIL2 NEIL2 LOC103088169 LOC103088169 LOC103082925 LOC103082925 LOC103081667 LOC103081667 LOC103068676 LOC103068676 LOC103079101 LOC103079101 NEIL3 NEIL3 NEIL1 NEIL1 LOC103089030 LOC103089030 LOC103079983 LOC103079983 LOC103074354 LOC103074354 TINF2 TINF2 UNG UNG POT1 POT1 LOC103071163 LOC103071163 LOC103070340 LOC103070340 LOC103071706 LOC103071706 TERF2 TERF2 LOC103071989 LOC103071989 LOC103073911 LOC103073911 LOC103074978 LOC103074978 MUTYH MUTYH NTHL1 NTHL1 OGG1 OGG1 TERF1 TERF1 TDG TDG LOC103080676 LOC103080676 LOC103074048 LOC103074048 MPG MPG ACD ACD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103090400Histone H2B; Belongs to the histone H2B family. (126 aa)
MBD4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (570 aa)
TERF2IPTelomeric repeat-binding factor 2-interacting protein 1. (399 aa)
LOC103079884Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103081255Histone H2B; Belongs to the histone H2B family. (142 aa)
LOC103080427Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081704Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081970Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103089645Histone H2A; Belongs to the histone H2A family. (128 aa)
SMUG1Single-strand selective monofunctional uracil DNA glycosylase. (271 aa)
LOC103068403Histone H2B type W-T-like; Belongs to the histone H2B family. (184 aa)
LOC103085965Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103077443Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103088445Histone H2A; Belongs to the histone H2A family. (117 aa)
LOC103080666Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103076624Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103074679Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103086798Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080928Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103076894Histone H2B; Belongs to the histone H2B family. (126 aa)
NEIL2Endonuclease 8-like 2. (338 aa)
LOC103088169Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103082925Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103068676Histone H2B type W-T-like; Belongs to the histone H2B family. (177 aa)
LOC103079101Histone H2B; Belongs to the histone H2B family. (126 aa)
NEIL3Endonuclease 8-like 3. (606 aa)
NEIL1Endonuclease 8-like 1. (390 aa)
LOC103089030Uncharacterized protein LOC103089030. (299 aa)
LOC103079983Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC103074354Probable DNA-3-methyladenine glycosylase-like. (203 aa)
TINF2TERF1-interacting nuclear factor 2. (453 aa)
UNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (312 aa)
POT1Protection of telomeres protein 1. (785 aa)
LOC103071163Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103070340Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071706Histone H2A; Belongs to the histone H2A family. (130 aa)
TERF2Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (539 aa)
LOC103071989Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103073911Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (524 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (304 aa)
OGG1LOW QUALITY PROTEIN: N-glycosylase/DNA lyase. (318 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (437 aa)
TDGG/T mismatch-specific thymine DNA glycosylase isoform X1. (405 aa)
LOC103080676Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
MPGDNA-3-methyladenine glycosylase. (277 aa)
ACDAdrenocortical dysplasia protein homolog. (454 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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