19 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTCHD4	Patched domain-containing protein 4-like. (846 aa)
	ABCA1	ATP-binding cassette sub-family A member 1. (2261 aa)
	LOC103088809	Patched domain-containing protein 4-like. (126 aa)
	LOC103069520	Patched domain-containing protein 4-like. (119 aa)
	BMP1	Metalloendopeptidase. (989 aa)
	PLEKHD1	Pleckstrin homology domain-containing family D member 1. (506 aa)
	SMPDL3A	Acid sphingomyelinase-like phosphodiesterase. (454 aa)
	PRKACB	cAMP-dependent protein kinase catalytic subunit beta. (274 aa)
	ZDHHC8	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (749 aa)
	ABCA2	ATP-binding cassette sub-family A member 2. (2570 aa)
	APOA1	Apolipoprotein A-I. (265 aa)
	PTCHD1	Patched domain-containing protein 1. (888 aa)
	ZDHHC19	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (363 aa)
	LOC103071060	Uncharacterized protein LOC103071060. (1035 aa)
	PRKACA	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily. (351 aa)
	A2ML1	LOW QUALITY PROTEIN: alpha-2-macroglobulin-like protein 1. (1385 aa)
	LOC103069153	Alpha-2-macroglobulin-like. (1482 aa)
	LOC103077690	Alpha-2-macroglobulin-like. (1475 aa)
	PTCHD3	LOW QUALITY PROTEIN: patched domain containing 3. (810 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCA1	APOA1	A0A340WJR5	A0A340XKE8	ATP-binding cassette sub-family A member 1.	Apolipoprotein A-I.	0.931
ABCA1	PRKACA	A0A340WJR5	A0A340Y602	ATP-binding cassette sub-family A member 1.	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.660
ABCA1	PRKACB	A0A340WJR5	A0A340XE43	ATP-binding cassette sub-family A member 1.	cAMP-dependent protein kinase catalytic subunit beta.	0.449
ABCA1	ZDHHC8	A0A340WJR5	A0A340XFA5	ATP-binding cassette sub-family A member 1.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.754
ABCA2	PRKACA	A0A340XJ75	A0A340Y602	ATP-binding cassette sub-family A member 2.	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.591
ABCA2	PRKACB	A0A340XJ75	A0A340XE43	ATP-binding cassette sub-family A member 2.	cAMP-dependent protein kinase catalytic subunit beta.	0.433
ABCA2	ZDHHC8	A0A340XJ75	A0A340XFA5	ATP-binding cassette sub-family A member 2.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.678
APOA1	ABCA1	A0A340XKE8	A0A340WJR5	Apolipoprotein A-I.	ATP-binding cassette sub-family A member 1.	0.931
PRKACA	ABCA1	A0A340Y602	A0A340WJR5	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	ATP-binding cassette sub-family A member 1.	0.660
PRKACA	ABCA2	A0A340Y602	A0A340XJ75	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	ATP-binding cassette sub-family A member 2.	0.591
PRKACA	PRKACB	A0A340Y602	A0A340XE43	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase catalytic subunit beta.	0.900
PRKACB	ABCA1	A0A340XE43	A0A340WJR5	cAMP-dependent protein kinase catalytic subunit beta.	ATP-binding cassette sub-family A member 1.	0.449
PRKACB	ABCA2	A0A340XE43	A0A340XJ75	cAMP-dependent protein kinase catalytic subunit beta.	ATP-binding cassette sub-family A member 2.	0.433
PRKACB	PRKACA	A0A340XE43	A0A340Y602	cAMP-dependent protein kinase catalytic subunit beta.	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.900
ZDHHC8	ABCA1	A0A340XFA5	A0A340WJR5	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	ATP-binding cassette sub-family A member 1.	0.754
ZDHHC8	ABCA2	A0A340XFA5	A0A340XJ75	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	ATP-binding cassette sub-family A member 2.	0.678