89 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VAPB	Vesicle-associated membrane protein-associated protein B. (243 aa)
	ARHGAP1	LOW QUALITY PROTEIN: rho GTPase-activating protein 1. (439 aa)
	RNFT2	RING finger and transmembrane domain-containing protein 2. (436 aa)
	ARHGEF11	Rho guanine nucleotide exchange factor 11 isoform X1. (1559 aa)
	DAAM2	Disheveled-associated activator of morphogenesis 2 isoform X1. (1113 aa)
	LOC103076448	A-kinase anchor protein 13-like. (184 aa)
	ARHGAP35	Rho GTPase-activating protein 35. (1500 aa)
	BCAM	Basal cell adhesion molecule. (628 aa)
	ERBB2IP	Protein LAP2 isoform X1. (1421 aa)
	ARHGEF1	Rho guanine nucleotide exchange factor 1 isoform X1. (913 aa)
	LOC103082505	Uncharacterized protein LOC103082505. (1392 aa)
	ROCK2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1389 aa)
	TMEM57	Macoilin isoform X1. (664 aa)
	ARHGEF28	Rho guanine nucleotide exchange factor 28. (1390 aa)
	IQGAP3	Ras GTPase-activating-like protein IQGAP3. (1612 aa)
	ARHGEF10L	Rho guanine nucleotide exchange factor 10-like protein. (1282 aa)
	RHOC	Rho-related GTP-binding protein RhoC. (193 aa)
	RTKN	Rhotekin isoform X1. (564 aa)
	MYO9B	Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2153 aa)
	ARHGDIA	Rho GDP-dissociation inhibitor 1 isoform X1. (204 aa)
	STX5	Syntaxin-5 isoform X1. (373 aa)
	FMNL2	Formin-like protein 2 isoform X3. (1083 aa)
	STARD13	stAR-related lipid transfer protein 13. (1126 aa)
	ARHGAP32	Rho GTPase-activating protein 32. (1871 aa)
	DAAM1	Disheveled-associated activator of morphogenesis 1 isoform X2. (1068 aa)
	MCF2L	Guanine nucleotide exchange factor DBS. (1060 aa)
	ARHGAP39	Rho GTPase-activating protein 39. (1110 aa)
	CIT	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1976 aa)
	JUP	Junction plakoglobin. (330 aa)
	TGM3	Protein-glutamine gamma-glutamyltransferase E. (779 aa)
	TGM6	LOW QUALITY PROTEIN: protein-glutamine gamma-glutamyltransferase 6. (718 aa)
	STK10	Serine/threonine-protein kinase 10. (967 aa)
	ARHGEF5	Rho guanine nucleotide exchange factor 5. (1576 aa)
	TFRC	Transferrin receptor protein 1 isoform X2. (770 aa)
	DLC1	Rho GTPase-activating protein 7 isoform X1. (1528 aa)
	DIAPH1	Protein diaphanous homolog 1 isoform X2. (1236 aa)
	ABCD3	ATP-binding cassette sub-family D member 3 isoform X2. (659 aa)
	TJP2	Tight junction protein ZO-2 isoform X1; Belongs to the MAGUK family. (1186 aa)
	MCF2L2	Probable guanine nucleotide exchange factor MCF2L2. (1114 aa)
	ARHGAP26	Rho GTPase-activating protein 26 isoform X1. (815 aa)
	ARHGEF25	Rho guanine nucleotide exchange factor 25 isoform X1. (618 aa)
	SLK	STE20-like serine/threonine-protein kinase isoform X1. (1240 aa)
	PKN3	Serine/threonine-protein kinase N3. (890 aa)
	IQGAP1	Ras GTPase-activating-like protein IQGAP1. (1627 aa)
	PKN1	Serine/threonine-protein kinase N1 isoform X2. (950 aa)
	OPHN1	Oligophrenin-1. (426 aa)
	PKN2	Serine/threonine-protein kinase N2 isoform X1. (983 aa)
	ARHGEF10	Rho guanine nucleotide exchange factor 10. (1347 aa)
	LOC103085751	Junction plakoglobin-like. (330 aa)
	LMAN1	Protein ERGIC-53. (518 aa)
	LOC103082455	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
	ARHGEF40	Rho guanine nucleotide exchange factor 40-like isoform X1. (804 aa)
	RNFT1	RING finger and transmembrane domain-containing protein 1. (398 aa)
	FLOT1	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (427 aa)
	BCR	Breakpoint cluster region protein isoform X2. (1272 aa)
	ARHGAP5	Rho GTPase-activating protein 5 isoform X1. (1503 aa)
	LOC103071630	LOW QUALITY PROTEIN: protein diaphanous homolog 3-like. (1083 aa)
	LOC103076697	Rac GTPase-activating protein 1-like. (304 aa)
	LOC103069796	Rho guanine nucleotide exchange factor 40-like; Belongs to the pancreatic ribonuclease family. (1050 aa)
	PTRF	Polymerase I and transcript release factor. (390 aa)
	ARHGAP18	Rho GTPase-activating protein 18. (664 aa)
	ARHGEF12	LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 12. (1563 aa)
	VAV2	Guanine nucleotide exchange factor VAV2 isoform X1. (878 aa)
	STOM	Erythrocyte band 7 integral membrane protein isoform X1. (335 aa)
	CAV1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
	C1QBP	Complement component 1 Q subcomponent-binding protein, mitochondrial. (278 aa)
	IPO11	Importin-11. (975 aa)
	FLOT2	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (428 aa)
	MCF2	Proto-oncogene DBL isoform X1. (996 aa)
	OLIG3	Oligodendrocyte transcription factor 3. (271 aa)
	LOC103085003	Oligophrenin-1-like. (430 aa)
	RHOA	Transforming protein RhoA isoform X1. (221 aa)
	LOC103068383	Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein-like. (1659 aa)
	OLIG2	Oligodendrocyte transcription factor 2. (270 aa)
	ANLN	Actin-binding protein anillin. (1152 aa)
	ARHGAP21	Rho GTPase-activating protein 21. (1952 aa)
	ARHGEF17	Rho guanine nucleotide exchange factor 17. (2065 aa)
	RTKN2	Rhotekin-2. (608 aa)
	OLIG1	Oligodendrocyte transcription factor 1. (270 aa)
	FMNL3	Formin-like protein 3 isoform X1. (1028 aa)
	LBR	lamin-B receptor. (621 aa)
	RACGAP1	Rac GTPase-activating protein 1. (344 aa)
	ACBD5	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (533 aa)
	VAMP3	Vesicle-associated membrane protein 3. (104 aa)
	DEPDC1B	DEP domain-containing protein 1B isoform X1. (529 aa)
	ABR	Active breakpoint cluster region-related protein. (964 aa)
	MCAM	Cell surface glycoprotein MUC18. (670 aa)
	PIK3R1	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (724 aa)
	VANGL1	Vang-like protein. (524 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD3	ACBD5	A0A340Y4J7	A0A340X005	ATP-binding cassette sub-family D member 3 isoform X2.	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	0.604
ABCD3	ANLN	A0A340Y4J7	A0A340WF43	ATP-binding cassette sub-family D member 3 isoform X2.	Actin-binding protein anillin.	0.563
ABCD3	CIT	A0A340Y4J7	A0A340Y0C3	ATP-binding cassette sub-family D member 3 isoform X2.	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.437
ABCD3	RHOA	A0A340Y4J7	A0A340W9Z8	ATP-binding cassette sub-family D member 3 isoform X2.	Transforming protein RhoA isoform X1.	0.404
ABCD3	RHOC	A0A340Y4J7	A0A340XJC1	ATP-binding cassette sub-family D member 3 isoform X2.	Rho-related GTP-binding protein RhoC.	0.404
ABCD3	STOM	A0A340Y4J7	A0A340WV95	ATP-binding cassette sub-family D member 3 isoform X2.	Erythrocyte band 7 integral membrane protein isoform X1.	0.407
ABR	ARHGAP1	A0A340X4U3	A0A340X747	Active breakpoint cluster region-related protein.	LOW QUALITY PROTEIN: rho GTPase-activating protein 1.	0.555
ABR	MYO9B	A0A340X4U3	A0A340XLQ6	Active breakpoint cluster region-related protein.	Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.641
ABR	RHOA	A0A340X4U3	A0A340W9Z8	Active breakpoint cluster region-related protein.	Transforming protein RhoA isoform X1.	0.460
ABR	RHOC	A0A340X4U3	A0A340XJC1	Active breakpoint cluster region-related protein.	Rho-related GTP-binding protein RhoC.	0.432
ACBD5	ABCD3	A0A340X005	A0A340Y4J7	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	ATP-binding cassette sub-family D member 3 isoform X2.	0.604
ACBD5	ANLN	A0A340X005	A0A340WF43	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	Actin-binding protein anillin.	0.422
ACBD5	VAPB	A0A340X005	A0A340WR15	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	Vesicle-associated membrane protein-associated protein B.	0.702
ANLN	ABCD3	A0A340WF43	A0A340Y4J7	Actin-binding protein anillin.	ATP-binding cassette sub-family D member 3 isoform X2.	0.563
ANLN	ACBD5	A0A340WF43	A0A340X005	Actin-binding protein anillin.	Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.	0.422
ANLN	ARHGAP1	A0A340WF43	A0A340X747	Actin-binding protein anillin.	LOW QUALITY PROTEIN: rho GTPase-activating protein 1.	0.581
ANLN	C1QBP	A0A340WF43	A0A340WVJ7	Actin-binding protein anillin.	Complement component 1 Q subcomponent-binding protein, mitochondrial.	0.578
ANLN	CAV1	A0A340WF43	A0A340WVG2	Actin-binding protein anillin.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.414
ANLN	CIT	A0A340WF43	A0A340Y0C3	Actin-binding protein anillin.	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.824
ANLN	DAAM1	A0A340WF43	A0A340XY72	Actin-binding protein anillin.	Disheveled-associated activator of morphogenesis 1 isoform X2.	0.547