34 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DBN1	Drebrin. (648 aa)
	LOC103080055	T-complex protein 1 subunit beta-like. (535 aa)
	GPS1	COP9 signalosome complex subunit 1 isoform X1. (527 aa)
	LOC103085998	RNA-binding motif protein, X chromosome-like. (383 aa)
	LOC103079703	RNA-binding Raly-like protein-like isoform X1. (292 aa)
	SPEN	Msx2-interacting protein. (3635 aa)
	CIRBP	Cold-inducible RNA-binding protein. (172 aa)
	LOC103074430	Heterogeneous nuclear ribonucleoprotein C-like. (292 aa)
	TRA2B	Transformer-2 protein homolog beta. (288 aa)
	LOC103082455	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
	LOC103075966	Heterogeneous nuclear ribonucleoprotein C-like isoform X1. (306 aa)
	RHOBTB1	Rho-related BTB domain-containing protein 1 isoform X1. (698 aa)
	STK38	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (465 aa)
	LOC103069469	Serine/arginine repetitive matrix protein 1-like. (729 aa)
	CUL3	Cullin-3; Belongs to the cullin family. (653 aa)
	CCT7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (543 aa)
	RBM3	Putative RNA-binding protein 3 isoform X1. (160 aa)
	RBMX	RNA-binding motif protein, X chromosome isoform X1. (391 aa)
	SCAF8	Protein SCAF8 isoform X1. (1348 aa)
	RNF20	E3 ubiquitin protein ligase; Belongs to the BRE1 family. (975 aa)
	SCAF4	LOW QUALITY PROTEIN: splicing factor, arginine/serine-rich 15. (1576 aa)
	STK38L	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (464 aa)
	COPS4	COP9 signalosome complex subunit 4 isoform X1. (406 aa)
	TRA2A	Transformer-2 protein homolog alpha isoform X1. (281 aa)
	RALY	RNA-binding protein Raly isoform X1. (332 aa)
	TXNL1	Thioredoxin-like protein 1. (289 aa)
	COPS2	COP9 signalosome complex subunit 2 isoform X1. (450 aa)
	MYO6	Unconventional myosin-VI isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1285 aa)
	ROCK2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1389 aa)
	RBBP6	E3 ubiquitin-protein ligase RBBP6 isoform X1. (1787 aa)
	PDE5A	Phosphodiesterase. (865 aa)
	LOC103086389	T-complex protein 1 subunit beta-like. (373 aa)
	LOC103072503	RNA-binding Raly-like protein-like. (184 aa)
	CPSF7	Cleavage and polyadenylation specificity factor subunit 7 isoform X1. (471 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT7	CUL3	A0A340WVJ3	A0A340WT14	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Cullin-3; Belongs to the cullin family.	0.485
CCT7	GPS1	A0A340WVJ3	A0A340XLT4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	COP9 signalosome complex subunit 1 isoform X1.	0.447
CCT7	LOC103080055	A0A340WVJ3	A0A340XQH9	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit beta-like.	0.997
CCT7	LOC103086389	A0A340WVJ3	A0A340XWA8	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit beta-like.	0.997
CCT7	RHOBTB1	A0A340WVJ3	A0A340WJ03	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Rho-related BTB domain-containing protein 1 isoform X1.	0.531
CCT7	STK38	A0A340WVJ3	A0A340Y4M6	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.459
CCT7	STK38L	A0A340WVJ3	A0A340WGR3	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.459
CCT7	TXNL1	A0A340WVJ3	A0A340X5T5	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Thioredoxin-like protein 1.	0.490
CIRBP	TRA2A	A0A340XJY5	A0A340WD79	Cold-inducible RNA-binding protein.	Transformer-2 protein homolog alpha isoform X1.	0.425
CIRBP	TRA2B	A0A340XJY5	A0A340WPK3	Cold-inducible RNA-binding protein.	Transformer-2 protein homolog beta.	0.422
COPS2	COPS4	A0A340X6I0	A0A340WG24	COP9 signalosome complex subunit 2 isoform X1.	COP9 signalosome complex subunit 4 isoform X1.	0.999
COPS2	CUL3	A0A340X6I0	A0A340WT14	COP9 signalosome complex subunit 2 isoform X1.	Cullin-3; Belongs to the cullin family.	0.835
COPS2	GPS1	A0A340X6I0	A0A340XLT4	COP9 signalosome complex subunit 2 isoform X1.	COP9 signalosome complex subunit 1 isoform X1.	0.998
COPS2	RHOBTB1	A0A340X6I0	A0A340WJ03	COP9 signalosome complex subunit 2 isoform X1.	Rho-related BTB domain-containing protein 1 isoform X1.	0.531
COPS4	COPS2	A0A340WG24	A0A340X6I0	COP9 signalosome complex subunit 4 isoform X1.	COP9 signalosome complex subunit 2 isoform X1.	0.999
COPS4	CUL3	A0A340WG24	A0A340WT14	COP9 signalosome complex subunit 4 isoform X1.	Cullin-3; Belongs to the cullin family.	0.834
COPS4	GPS1	A0A340WG24	A0A340XLT4	COP9 signalosome complex subunit 4 isoform X1.	COP9 signalosome complex subunit 1 isoform X1.	0.998
COPS4	RHOBTB1	A0A340WG24	A0A340WJ03	COP9 signalosome complex subunit 4 isoform X1.	Rho-related BTB domain-containing protein 1 isoform X1.	0.525
CPSF7	LOC103069469	A0A340XT40	A0A340XH14	Cleavage and polyadenylation specificity factor subunit 7 isoform X1.	Serine/arginine repetitive matrix protein 1-like.	0.606
CPSF7	LOC103074430	A0A340XT40	A0A340XJG6	Cleavage and polyadenylation specificity factor subunit 7 isoform X1.	Heterogeneous nuclear ribonucleoprotein C-like.	0.463