STRINGSTRING
LOC103080666 LOC103080666 LOC103076624 LOC103076624 LOC103074679 LOC103074679 KAT2B KAT2B GTF2A1 GTF2A1 LOC103086798 LOC103086798 LOC103080928 LOC103080928 LOC103076894 LOC103076894 CDK9 CDK9 USF2 USF2 LOC103075047 LOC103075047 LOC103088169 LOC103088169 LOC103082925 LOC103082925 LOC103081667 LOC103081667 LOC103079101 LOC103079101 LOC103077708 LOC103077708 LOC103076354 LOC103076354 POLR2H POLR2H PRMT8 PRMT8 LOC103087252 LOC103087252 LOC103068676 LOC103068676 LOC103068403 LOC103068403 TLE3 TLE3 ERBB4 ERBB4 FKBP4 FKBP4 PTGES3 PTGES3 ZFP42 ZFP42 LOC103085477 LOC103085477 HDAC1 HDAC1 USF1 USF1 UPK3B UPK3B EBAG9 EBAG9 POLR2C POLR2C LOC103089049 LOC103089049 KANK1 KANK1 GATA3 GATA3 CITED1 CITED1 LOC103072956 LOC103072956 POLR2A POLR2A LOC103090400 LOC103090400 ESR1 ESR1 ZNF217 ZNF217 GREB1 GREB1 DDX5 DDX5 POU2F1 POU2F1 CBFB CBFB HSP90AB1 HSP90AB1 FOSB FOSB ZC3H12D ZC3H12D POLR2E POLR2E GTF2F1 GTF2F1 KANK2 KANK2 KANK3 KANK3 GTF2A2 GTF2A2 FOS FOS POLR2D POLR2D KDM1A KDM1A KDM4B KDM4B CARM1 CARM1 JUND JUND KAT5 KAT5 PRMT1 PRMT1 POLR2G POLR2G CXXC5 CXXC5 LOC103081973 LOC103081973 LOC103079884 LOC103079884 LOC103081255 LOC103081255 LOC103087776 LOC103087776 LOC103074911 LOC103074911 MED1 MED1 KANK4 KANK4 LOC103080427 LOC103080427 LOC103081704 LOC103081704 LOC103081970 LOC103081970 LOC103070584 LOC103070584 LOC103089645 LOC103089645 GTF2F2 GTF2F2 FOXA1 FOXA1 NCOA2 NCOA2 ZC3H12B ZC3H12B LOC103083434 LOC103083434 RUNX1 RUNX1 LOC103075119 LOC103075119 GREB1L GREB1L LOC103075485 LOC103075485 TBPL2 TBPL2 TBP TBP NCOA3 NCOA3 LOC103079983 LOC103079983 LOC103073174 LOC103073174 LOC103071163 LOC103071163 LOC103070340 LOC103070340 LOC103071706 LOC103071706 LOC103071989 LOC103071989 LOC103073911 LOC103073911 LOC103074978 LOC103074978 TBPL1 TBPL1 CREBBP CREBBP POLR2F POLR2F TRPS1 TRPS1 EP300 EP300 TNRC6B TNRC6B LOC103080566 LOC103080566 CCNT1 CCNT1 LOC103080676 LOC103080676 TFF3 TFF3 LOC103074048 LOC103074048 MYB MYB NCOA1 NCOA1 HSP90AA1 HSP90AA1 NR5A2 NR5A2 POLR2B POLR2B NRIP1 NRIP1 YY1 YY1 ZC3H12A ZC3H12A ZC3H12C ZC3H12C GTF2A1L GTF2A1L LOC103085965 LOC103085965 LOC103077443 LOC103077443 LOC103089763 LOC103089763 POLR2I POLR2I LOC103088445 LOC103088445 LOC103081931 LOC103081931
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103080666Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103076624Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103074679Histone H2B; Belongs to the histone H2B family. (127 aa)
KAT2BHistone acetyltransferase KAT2B. (735 aa)
GTF2A1Transcription initiation factor IIA subunit 1 isoform X2. (380 aa)
LOC103086798Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103080928Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103076894Histone H2B; Belongs to the histone H2B family. (126 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
USF2Upstream stimulatory factor 2 isoform X1. (356 aa)
LOC103075047LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like. (1710 aa)
LOC103088169Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC103082925Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081667Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103079101Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103077708Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103076354Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
PRMT8Protein arginine N-methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (394 aa)
LOC103087252DNA-directed RNA polymerase II subunit RPB11-like. (117 aa)
LOC103068676Histone H2B type W-T-like; Belongs to the histone H2B family. (177 aa)
LOC103068403Histone H2B type W-T-like; Belongs to the histone H2B family. (184 aa)
TLE3Transducin-like enhancer protein 3 isoform X1. (782 aa)
ERBB4Receptor protein-tyrosine kinase. (1308 aa)
FKBP4Peptidylprolyl isomerase. (458 aa)
PTGES3Prostaglandin E synthase 3 isoform X1. (160 aa)
ZFP42Zinc finger protein 42 homolog. (299 aa)
LOC103085477Uroplakin-3b-like protein-like. (254 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (538 aa)
USF1Upstream stimulatory factor 1 isoform X1. (310 aa)
UPK3BUroplakin-3b. (280 aa)
EBAG9Receptor-binding cancer antigen expressed on SiSo cells; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases. (213 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (275 aa)
LOC103089049DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2732 aa)
KANK1KN motif and ankyrin repeat domain-containing protein 1. (1351 aa)
GATA3Trans-acting T-cell-specific transcription factor GATA-3 isoform X1. (444 aa)
CITED1Cbp/p300-interacting transactivator 1 isoform X1. (221 aa)
LOC103072956Uncharacterized protein LOC103072956. (225 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
LOC103090400Histone H2B; Belongs to the histone H2B family. (126 aa)
ESR1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (595 aa)
ZNF217Zinc finger protein 217. (1048 aa)
GREB1Protein GREB1. (1944 aa)
DDX5Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (614 aa)
POU2F1POU domain protein. (756 aa)
CBFBCore-binding factor subunit beta isoform X1. (187 aa)
HSP90AB1Heat shock protein HSP 90-beta isoform X1. (724 aa)
FOSBProtein fosB isoform X1. (341 aa)
ZC3H12DProbable ribonuclease ZC3H12D. (495 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
KANK2KN motif and ankyrin repeat domain-containing protein 2 isoform X1. (871 aa)
KANK3KN motif and ankyrin repeat domain-containing protein 3. (809 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
FOSProto-oncogene c-Fos isoform X1. (380 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (877 aa)
KDM4BLysine-specific demethylase 4B. (1088 aa)
CARM1Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (605 aa)
JUNDTranscription factor jun-D. (345 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (546 aa)
PRMT1Protein arginine N-methyltransferase 1 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (371 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (199 aa)
CXXC5CXXC-type zinc finger protein 5 isoform X1. (320 aa)
LOC103081973Histone-arginine methyltransferase CARM1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (412 aa)
LOC103079884Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103081255Histone H2B; Belongs to the histone H2B family. (142 aa)
LOC103087776Sialidase-like. (251 aa)
LOC103074911Heat shock cognate 90 kDa protein-like. (518 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1579 aa)
KANK4KN motif and ankyrin repeat domain-containing protein 4. (1003 aa)
LOC103080427Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081704Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103081970Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103070584UPF0722 protein C11orf88 homolog. (168 aa)
LOC103089645Histone H2A; Belongs to the histone H2A family. (128 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
FOXA1Hepatocyte nuclear factor 3-alpha. (466 aa)
NCOA2Nuclear receptor coactivator. (1464 aa)
ZC3H12BProbable ribonuclease ZC3H12B. (836 aa)
LOC103083434DNA-directed RNA polymerases I, II, and III subunit RPABC5-like. (81 aa)
RUNX1Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. (480 aa)
LOC103075119Progesterone receptor-like. (347 aa)
GREB1LGREB1-like protein. (1856 aa)
LOC103075485Progesterone receptor-like isoform X1. (936 aa)
TBPL2TATA box-binding protein-like protein 2. (343 aa)
TBPTATA-box-binding protein isoform X1. (329 aa)
NCOA3Nuclear receptor coactivator. (1462 aa)
LOC103079983Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC103073174Heat shock cognate 90 kDa protein-like. (634 aa)
LOC103071163Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103070340Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103071706Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103071989Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103073911Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103074978Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
CREBBPCREB-binding protein isoform X1. (2429 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
TRPS1Zinc finger transcription factor Trps1 isoform X1. (1293 aa)
EP300Histone acetyltransferase p300. (2420 aa)
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X1. (1831 aa)
LOC103080566DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (973 aa)
CCNT1cyclin-T1; Belongs to the cyclin family. (727 aa)
LOC103080676Histone H2A; Belongs to the histone H2A family. (129 aa)
TFF3Trefoil factor 3. (94 aa)
LOC103074048Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
MYBTranscriptional activator Myb isoform X1. (640 aa)
NCOA1Nuclear receptor coactivator. (1440 aa)
HSP90AA1Heat shock protein HSP 90-alpha. (732 aa)
NR5A2LOW QUALITY PROTEIN: nuclear receptor subfamily 5 group A member 2. (541 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
NRIP1Nuclear receptor-interacting protein 1. (1156 aa)
YY1Transcriptional repressor protein YY1. (412 aa)
ZC3H12ARibonuclease ZC3H12A. (583 aa)
ZC3H12CProbable ribonuclease ZC3H12C isoform X1. (883 aa)
GTF2A1LLOW QUALITY PROTEIN: general transcription factor IIA, 1-like. (479 aa)
LOC103085965Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103077443Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103089763Uncharacterized protein LOC103089763. (411 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
LOC103088445Histone H2A; Belongs to the histone H2A family. (117 aa)
LOC103081931Histone H3; Belongs to the histone H3 family. (150 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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