15 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THAP7	THAP domain-containing protein 7. (313 aa)
	THAP1	THAP domain-containing protein 1. (213 aa)
	PRKAR2B	cAMP-dependent protein kinase type II-beta regulatory subunit. (415 aa)
	PRKAR1A	cAMP-dependent protein kinase type I-alpha regulatory subunit. (380 aa)
	SHC1	SHC-transforming protein 1 isoform X1. (584 aa)
	FN1	LOW QUALITY PROTEIN: fibronectin. (2483 aa)
	PRKACB	cAMP-dependent protein kinase catalytic subunit beta. (274 aa)
	THAP6	THAP domain-containing protein 6. (222 aa)
	GPER1	G-protein coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (354 aa)
	PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit isoform X1. (381 aa)
	PRKACA	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily. (351 aa)
	ITGA5	Integrin alpha-5; Belongs to the integrin alpha chain family. (1053 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (805 aa)
	LOC103070240	Cyclic nucleotide-binding domain-containing protein 2-like. (583 aa)
	PRKAR2A	cAMP-dependent protein kinase type II-alpha regulatory subunit isoform X1. (401 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FN1	ITGA5	A0A340XBS1	A0A340Y655	LOW QUALITY PROTEIN: fibronectin.	Integrin alpha-5; Belongs to the integrin alpha chain family.	0.939
FN1	ITGB1	A0A340XBS1	A0A340YIX2	LOW QUALITY PROTEIN: fibronectin.	Integrin beta; Belongs to the integrin beta chain family.	0.951
ITGA5	FN1	A0A340Y655	A0A340XBS1	Integrin alpha-5; Belongs to the integrin alpha chain family.	LOW QUALITY PROTEIN: fibronectin.	0.939
ITGA5	ITGB1	A0A340Y655	A0A340YIX2	Integrin alpha-5; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.999
ITGA5	SHC1	A0A340Y655	A0A340X9E5	Integrin alpha-5; Belongs to the integrin alpha chain family.	SHC-transforming protein 1 isoform X1.	0.567
ITGB1	FN1	A0A340YIX2	A0A340XBS1	Integrin beta; Belongs to the integrin beta chain family.	LOW QUALITY PROTEIN: fibronectin.	0.951
ITGB1	ITGA5	A0A340YIX2	A0A340Y655	Integrin beta; Belongs to the integrin beta chain family.	Integrin alpha-5; Belongs to the integrin alpha chain family.	0.999
ITGB1	PRKACA	A0A340YIX2	A0A340Y602	Integrin beta; Belongs to the integrin beta chain family.	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.901
ITGB1	PRKACB	A0A340YIX2	A0A340XE43	Integrin beta; Belongs to the integrin beta chain family.	cAMP-dependent protein kinase catalytic subunit beta.	0.901
ITGB1	SHC1	A0A340YIX2	A0A340X9E5	Integrin beta; Belongs to the integrin beta chain family.	SHC-transforming protein 1 isoform X1.	0.662
LOC103070240	PRKACA	A0A340WLG3	A0A340Y602	Cyclic nucleotide-binding domain-containing protein 2-like.	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.613
LOC103070240	PRKACB	A0A340WLG3	A0A340XE43	Cyclic nucleotide-binding domain-containing protein 2-like.	cAMP-dependent protein kinase catalytic subunit beta.	0.613
LOC103070240	THAP1	A0A340WLG3	A0A340X2H6	Cyclic nucleotide-binding domain-containing protein 2-like.	THAP domain-containing protein 1.	0.613
LOC103070240	THAP6	A0A340WLG3	A0A340XVV1	Cyclic nucleotide-binding domain-containing protein 2-like.	THAP domain-containing protein 6.	0.613
LOC103070240	THAP7	A0A340WLG3	A0A340WW33	Cyclic nucleotide-binding domain-containing protein 2-like.	THAP domain-containing protein 7.	0.613
PRKACA	ITGB1	A0A340Y602	A0A340YIX2	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	Integrin beta; Belongs to the integrin beta chain family.	0.901
PRKACA	LOC103070240	A0A340Y602	A0A340WLG3	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	Cyclic nucleotide-binding domain-containing protein 2-like.	0.613
PRKACA	PRKACB	A0A340Y602	A0A340XE43	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase catalytic subunit beta.	0.900
PRKACA	PRKAR1A	A0A340Y602	A0A340X7X3	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase type I-alpha regulatory subunit.	0.999
PRKACA	PRKAR1B	A0A340Y602	A0A340Y5X6	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase type I-beta regulatory subunit isoform X1.	0.999