61 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DDX4	Probable ATP-dependent RNA helicase DDX4; Belongs to the DEAD box helicase family. (706 aa)
	MAPK1IP1L	MAPK-interacting and spindle-stabilizing protein-like. (245 aa)
	PKP4	Plakophilin-4 isoform X1. (1193 aa)
	RND3	Rho-related GTP-binding protein RhoE. (244 aa)
	RBM39	RNA-binding protein 39 isoform X2. (530 aa)
	MAP4	Microtubule-associated protein. (1105 aa)
	WDR6	WD repeat-containing protein 6. (1120 aa)
	LEMD3	Inner nuclear membrane protein Man1. (927 aa)
	KTN1	Kinectin isoform X1. (1407 aa)
	ARHGAP21	Rho GTPase-activating protein 21. (1952 aa)
	KCTD10	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3. (315 aa)
	LOC103083261	Protein HEG homolog 1-like. (1196 aa)
	CKAP4	Cytoskeleton-associated protein 4. (596 aa)
	RASAL2	Ras GTPase-activating protein nGAP. (1280 aa)
	LOC103072909	Protein HEG homolog 1-like. (136 aa)
	LOC103082455	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1354 aa)
	PICALM	Phosphatidylinositol-binding clathrin assembly protein isoform X1. (652 aa)
	RBM23	Probable RNA-binding protein 23. (440 aa)
	ARHGAP5	Rho GTPase-activating protein 5 isoform X1. (1503 aa)
	TNFAIP1	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2. (316 aa)
	PLEKHG5	Pleckstrin homology domain-containing family G member 5 isoform X1. (1074 aa)
	CAV1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
	RBM3	Putative RNA-binding protein 3 isoform X1. (160 aa)
	NISCH	Nischarin isoform X1. (1494 aa)
	RBMX	RNA-binding motif protein, X chromosome isoform X1. (391 aa)
	FLOT2	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (428 aa)
	CPD	Carboxypeptidase D. (1160 aa)
	LOC103090651	LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 26-like. (1701 aa)
	DSG1	Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1046 aa)
	KCTD13	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1. (329 aa)
	DEPDC1B	DEP domain-containing protein 1B isoform X1. (529 aa)
	MACF1	Microtubule-actin cross-linking factor 1. (5423 aa)
	CTNND2	Catenin delta-2 isoform X1. (889 aa)
	LOC103069178	Carboxypeptidase D-like. (174 aa)
	TXNL1	Thioredoxin-like protein 1. (289 aa)
	PIK3R1	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (724 aa)
	VANGL1	Vang-like protein. (524 aa)
	CKB	Creatine kinase B-type; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
	ARHGAP35	Rho GTPase-activating protein 35. (1500 aa)
	UBXN11	LOW QUALITY PROTEIN: UBX domain-containing protein 11. (468 aa)
	SEMA4F	semaphorin-4F; Belongs to the semaphorin family. (777 aa)
	FAM83B	Protein FAM83B. (1011 aa)
	EPHA2	Ephrin type-A receptor 2. (975 aa)
	CIRBP	Cold-inducible RNA-binding protein. (172 aa)
	LOC103085998	RNA-binding motif protein, X chromosome-like. (383 aa)
	VANGL2	Vang-like protein. (522 aa)
	PIK3R2	Phosphatidylinositol 3-kinase regulatory subunit beta. (724 aa)
	LOC103075854	Ribosome-binding protein 1-like. (975 aa)
	LOC103077381	Ribosome-binding protein 1-like. (221 aa)
	DLG5	Disks large homolog 5; Belongs to the MAGUK family. (1921 aa)
	SCRIB	LOW QUALITY PROTEIN: protein scribble homolog. (1659 aa)
	DSP	Desmoplakin isoform X1. (2877 aa)
	ANKRD7	LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 7. (238 aa)
	ANKRD17	Ankyrin repeat domain-containing protein 17 isoform X1. (2605 aa)
	PTPN13	Tyrosine-protein phosphatase non-receptor type 13 isoform X2. (2493 aa)
	CCDC88A	Girdin isoform X1. (2026 aa)
	KCNRG	Potassium channel regulatory protein. (273 aa)
	TMOD3	Tropomodulin-3. (352 aa)
	DST	Dystonin isoform X1. (5680 aa)
	SEMA4C	semaphorin-4C; Belongs to the semaphorin family. (833 aa)
	SEMA4G	semaphorin-4G; Belongs to the semaphorin family. (843 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP21	ARHGAP5	A0A340WFX5	A0A340WRH4	Rho GTPase-activating protein 21.	Rho GTPase-activating protein 5 isoform X1.	0.424
ARHGAP21	CCDC88A	A0A340WFX5	A0A340Y2T3	Rho GTPase-activating protein 21.	Girdin isoform X1.	0.436
ARHGAP21	RND3	A0A340WFX5	A0A340WAT3	Rho GTPase-activating protein 21.	Rho-related GTP-binding protein RhoE.	0.562
ARHGAP21	WDR6	A0A340WFX5	A0A340WF88	Rho GTPase-activating protein 21.	WD repeat-containing protein 6.	0.448
ARHGAP35	ARHGAP5	A0A340XAE8	A0A340WRH4	Rho GTPase-activating protein 35.	Rho GTPase-activating protein 5 isoform X1.	0.900
ARHGAP35	RASAL2	A0A340XAE8	A0A340WLT9	Rho GTPase-activating protein 35.	Ras GTPase-activating protein nGAP.	0.551
ARHGAP35	RND3	A0A340XAE8	A0A340WAT3	Rho GTPase-activating protein 35.	Rho-related GTP-binding protein RhoE.	0.796
ARHGAP5	ARHGAP21	A0A340WRH4	A0A340WFX5	Rho GTPase-activating protein 5 isoform X1.	Rho GTPase-activating protein 21.	0.424
ARHGAP5	ARHGAP35	A0A340WRH4	A0A340XAE8	Rho GTPase-activating protein 5 isoform X1.	Rho GTPase-activating protein 35.	0.900
ARHGAP5	DST	A0A340WRH4	A0A340YC49	Rho GTPase-activating protein 5 isoform X1.	Dystonin isoform X1.	0.623
ARHGAP5	KCTD10	A0A340WRH4	A0A340WHV8	Rho GTPase-activating protein 5 isoform X1.	BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3.	0.759
ARHGAP5	RASAL2	A0A340WRH4	A0A340WLT9	Rho GTPase-activating protein 5 isoform X1.	Ras GTPase-activating protein nGAP.	0.751
ARHGAP5	RND3	A0A340WRH4	A0A340WAT3	Rho GTPase-activating protein 5 isoform X1.	Rho-related GTP-binding protein RhoE.	0.918
CAV1	EPHA2	A0A340WVG2	A0A340XJY3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Ephrin type-A receptor 2.	0.407
CAV1	FLOT2	A0A340WVG2	A0A340WXW1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.593
CAV1	RND3	A0A340WVG2	A0A340WAT3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Rho-related GTP-binding protein RhoE.	0.455
CCDC88A	ARHGAP21	A0A340Y2T3	A0A340WFX5	Girdin isoform X1.	Rho GTPase-activating protein 21.	0.436
CCDC88A	RND3	A0A340Y2T3	A0A340WAT3	Girdin isoform X1.	Rho-related GTP-binding protein RhoE.	0.518
CCDC88A	WDR6	A0A340Y2T3	A0A340WF88	Girdin isoform X1.	WD repeat-containing protein 6.	0.453
CIRBP	NISCH	A0A340XJY5	A0A340WW99	Cold-inducible RNA-binding protein.	Nischarin isoform X1.	0.412