23 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)
	BMP5	Bone morphogenetic protein 5 isoform X1. (454 aa)
	TGFB2	Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
	INHBB	Inhibin beta B chain. (511 aa)
	BMP2	Bone morphogenetic protein 2. (395 aa)
	INHBA	LOW QUALITY PROTEIN: inhibin beta A chain. (430 aa)
	GDF11	Growth/differentiation factor 11. (404 aa)
	MSTN	Growth/differentiation factor 8. (366 aa)
	BMP6	Bone morphogenetic protein 6. (495 aa)
	BMP10	Bone morphogenetic protein 10. (421 aa)
	GDF7	Growth/differentiation factor 7. (457 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (391 aa)
	TGFB3	Transforming growth factor beta-3. (456 aa)
	LOC103073398	Left-right determination factor. (367 aa)
	LOC103077537	Bone morphogenetic protein 8B-like. (136 aa)
	BMP8B	Bone morphogenetic protein 8B. (403 aa)
	LOC103089261	Bone morphogenetic protein 8B-like. (403 aa)
	GDF2	Growth/differentiation factor 2. (431 aa)
	LEFTY2	Left-right determination factor. (367 aa)
	GDF6	Growth/differentiation factor 6. (461 aa)
	GDF5	Growth/differentiation factor 5. (499 aa)
	BMP7	Bone morphogenetic protein 7 isoform X1. (431 aa)
	BMP3	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (475 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP10	BMP4	A0A340XS48	A0A340W9C9	Bone morphogenetic protein 10.	Bone morphogenetic protein 4 isoform X1.	0.554
BMP10	BMP5	A0A340XS48	A0A340YIK5	Bone morphogenetic protein 10.	Bone morphogenetic protein 5 isoform X1.	0.562
BMP10	GDF2	A0A340XS48	A0A340X2F6	Bone morphogenetic protein 10.	Growth/differentiation factor 2.	0.840
BMP2	BMP4	A0A340YBD2	A0A340W9C9	Bone morphogenetic protein 2.	Bone morphogenetic protein 4 isoform X1.	0.927
BMP2	BMP5	A0A340YBD2	A0A340YIK5	Bone morphogenetic protein 2.	Bone morphogenetic protein 5 isoform X1.	0.546
BMP2	BMP6	A0A340YBD2	A0A340XYK1	Bone morphogenetic protein 2.	Bone morphogenetic protein 6.	0.953
BMP2	BMP7	A0A340YBD2	A0A340WIR5	Bone morphogenetic protein 2.	Bone morphogenetic protein 7 isoform X1.	0.655
BMP2	GDF5	A0A340YBD2	A0A340WJT7	Bone morphogenetic protein 2.	Growth/differentiation factor 5.	0.488
BMP2	TGFB1	A0A340YBD2	A0A340XI36	Bone morphogenetic protein 2.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.447
BMP2	TGFB2	A0A340YBD2	A0A340YG76	Bone morphogenetic protein 2.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.409
BMP3	TGFB1	A0A340WG49	A0A340XI36	Bone morphogenetic protein 3; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.439
BMP4	BMP10	A0A340W9C9	A0A340XS48	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 10.	0.554
BMP4	BMP2	A0A340W9C9	A0A340YBD2	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 2.	0.927
BMP4	BMP5	A0A340W9C9	A0A340YIK5	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 5 isoform X1.	0.665
BMP4	BMP6	A0A340W9C9	A0A340XYK1	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 6.	0.964
BMP4	BMP7	A0A340W9C9	A0A340WIR5	Bone morphogenetic protein 4 isoform X1.	Bone morphogenetic protein 7 isoform X1.	0.790
BMP4	GDF5	A0A340W9C9	A0A340WJT7	Bone morphogenetic protein 4 isoform X1.	Growth/differentiation factor 5.	0.416
BMP5	BMP10	A0A340YIK5	A0A340XS48	Bone morphogenetic protein 5 isoform X1.	Bone morphogenetic protein 10.	0.562
BMP5	BMP2	A0A340YIK5	A0A340YBD2	Bone morphogenetic protein 5 isoform X1.	Bone morphogenetic protein 2.	0.546
BMP5	BMP4	A0A340YIK5	A0A340W9C9	Bone morphogenetic protein 5 isoform X1.	Bone morphogenetic protein 4 isoform X1.	0.665