STRINGSTRING
EKF05389.1 EKF05389.1 EKF03345.1 EKF03345.1 EKF03346.1 EKF03346.1 EKF03347.1 EKF03347.1 EKF03349.1 EKF03349.1 EKF03351.1 EKF03351.1 EKE97639.1 EKE97639.1 EKF02358.1 EKF02358.1 EKF02360.1 EKF02360.1 EKF02361.1 EKF02361.1 EKF02362.1 EKF02362.1 EKF02371.1 EKF02371.1 EKF02372.1 EKF02372.1 EKF02373.1 EKF02373.1 EKF02374.1 EKF02374.1 EKF02375.1 EKF02375.1 EKF02378.1 EKF02378.1 EKF02379.1 EKF02379.1 EKF02380.1 EKF02380.1 EKF02381.1 EKF02381.1 EKF01782.1 EKF01782.1 EKF01783.1 EKF01783.1 EKF01398.1 EKF01398.1 EKF01400.1 EKF01400.1 EKF01401.1 EKF01401.1 EKF00956.1 EKF00956.1 EKF00957.1 EKF00957.1 EKF00819.1 EKF00819.1 EKF00109.1 EKF00109.1 cpcS-5 cpcS-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EKF05389.1Allophycocyanin; KEGG: amt:Amet_3605 0.98 alanine--glyoxylate transaminase K00839. (161 aa)
EKF03345.1Phycocyanin beta subunit; KEGG: mpu:MYPU_2670 0.15 atpG; F0F1 ATP synthase subunit gamma K02115. (173 aa)
EKF03346.1Phycocyanin alpha subunit; KEGG: rpf:Rpic12D_1629 0.54 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455. (163 aa)
EKF03347.1Phycobilisome rod-core linker protein; KEGG: dme:Dmel_CG14529 0.82 CG14529 gene product from transcript CG14529-RA; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (271 aa)
EKF03349.1Phycobilisome rod-core linker; KEGG: ctc:CTC00194 0.084 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Belongs to the phycobilisome linker protein family. (288 aa)
EKF03351.1Phycocyanin-associated protein; KEGG: cyp:PCC8801_2543 4.1e-11 oxidoreductase FAD/NAD(P)-binding domain protein; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (51 aa)
EKE97639.1Allophycocyanin beta subunit; KEGG: pth:PTH_0270 0.76 paaJ; acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase. (169 aa)
EKF02358.1Phycobilisome linker protein ApcE; KEGG: cak:Caul_4567 0.96 truA; tRNA pseudouridine synthase A K06173; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the phycobilisome linker protein family. (1079 aa)
EKF02360.1Allophycocyanin alpha subunit; KEGG: rba:RB2661 0.62 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075; Psort location: Cytoplasmic, score: 8.96. (161 aa)
EKF02361.1Allophycocyanin beta subunit; KEGG: mdi:METDI3402 0.95 putative L-aspartate oxidase (NadB-like) K00278. (162 aa)
EKF02362.1Allophycocyanin-associated protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (68 aa)
EKF02371.1Phycocyanin beta subunit; KEGG: xom:XOO_3079 0.55 trpA; tryptophan synthase subunit alpha K01695. (172 aa)
EKF02372.1Phycocyanin alpha subunit; KEGG: lpl:lp_0251 0.46 selA; L-seryl-tRNA(sec) selenium transferase (putative) K01042. (162 aa)
EKF02373.1Phycocyanin-associated protein; KEGG: aae:aq_642 0.86 RNA 3'-terminal-phosphate cyclase K01974; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (269 aa)
EKF02374.1Phycocyanin-associated protein; KEGG: cyn:Cyan7425_5047 0.18 oxidoreductase FAD/NAD(P)-binding domain protein; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (289 aa)
EKF02375.1Phycocyanin-associated protein; KEGG: mar:MAE_12570 1.2e-15 petH; ferredoxin-NADP oxidoreductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (85 aa)
EKF02378.1Phycocyanin beta subunit; KEGG: sil:SPO0923 0.37 carB; carbamoyl phosphate synthase large subunit K01955. (172 aa)
EKF02379.1Phycocyanin alpha subunit; KEGG: cak:Caul_2415 0.96 alpha-N-arabinofuranosidase. (162 aa)
EKF02380.1KEGG: amr:AM1_C0118 1.6e-82 cpcE; phycocyanobilin lyase subunit alpha; K02288 phycocyanobilin lyase alpha subunit; Psort location: Cytoplasmic, score: 8.96. (276 aa)
EKF02381.1KEGG: syg:sync_0485 2.0e-27 cpcF; phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit K02289. (273 aa)
EKF01782.1C-phycoerythrin beta subunit; KEGG: ach:Achl_0940 0.39 methylmalonate-semialdehyde dehydrogenase; K00140 methylmalonate-semialdehyde dehydrogenase. (184 aa)
EKF01783.1C-phycoerythrin alpha subunit; KEGG: npu:Npun_F2351 2.0e-06 glutathione S-transferase-like protein. (164 aa)
EKF01398.1Phycocerrythrocyanin-associated protein; KEGG: cyt:cce_0994 0.0055 petH; ferredoxin-NADP oxidoreductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (286 aa)
EKF01400.1Phycoerythrocyanin-associated protein; KEGG: mgm:Mmc1_0129 0.998 type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (249 aa)
EKF01401.1Phycoerythrocyanin-associated protein; KEGG: cli:Clim_0029 0.34 F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (252 aa)
EKF00956.1Putative phycocyanin-associated phycobilisome linker protein CpcD; KEGG: ana:all4121 8.2e-20 petH; ferredoxin--NADP(+) reductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (93 aa)
EKF00957.1Phycobilisome linker polypeptide protein; KEGG: bxe:Bxe_A0988 0.93 ADP-glyceromanno-heptose 6-epimerase precursor K03274; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (251 aa)
EKF00819.1Phycobilisome linker polypeptide; KEGG: rrs:RoseRS_2729 0.67 hypothetical protein; K03534 L-rhamnose mutarotase; Psort location: Cytoplasmic, score: 8.96. (193 aa)
EKF00109.1Phycobilisome rod-core linker protein; KEGG: cpf:CPF_0460 0.40 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (251 aa)
cpcS-5CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (210 aa)
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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