STRINGSTRING
EKF02378.1 EKF02378.1 EKF02379.1 EKF02379.1 EKF02380.1 EKF02380.1 EKF02381.1 EKF02381.1 EKF00956.1 EKF00956.1 EKF00957.1 EKF00957.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EKF02378.1Phycocyanin beta subunit; KEGG: sil:SPO0923 0.37 carB; carbamoyl phosphate synthase large subunit K01955. (172 aa)
EKF02379.1Phycocyanin alpha subunit; KEGG: cak:Caul_2415 0.96 alpha-N-arabinofuranosidase. (162 aa)
EKF02380.1KEGG: amr:AM1_C0118 1.6e-82 cpcE; phycocyanobilin lyase subunit alpha; K02288 phycocyanobilin lyase alpha subunit; Psort location: Cytoplasmic, score: 8.96. (276 aa)
EKF02381.1KEGG: syg:sync_0485 2.0e-27 cpcF; phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit K02289. (273 aa)
EKF00956.1Putative phycocyanin-associated phycobilisome linker protein CpcD; KEGG: ana:all4121 8.2e-20 petH; ferredoxin--NADP(+) reductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (93 aa)
EKF00957.1Phycobilisome linker polypeptide protein; KEGG: bxe:Bxe_A0988 0.93 ADP-glyceromanno-heptose 6-epimerase precursor K03274; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (251 aa)
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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