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| | psbB | Photosystem II P680 chlorophyll A; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (485 aa) |
| | EKE96609.1 | Photosystem II Q(b) protein; KEGG: pmo:Pmob_0065 0.65 RnfA-Nqr electron transport subunit; K00350 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Psort location: CytoplasmicMembrane, score: 10.00. (222 aa) |
| | EKE96608.1 | Hypothetical protein; KEGG: ote:Oter_4077 0.17 cytochrome c oxidase, cbb3-type, subunit I; Psort location: CytoplasmicMembrane, score: 10.00. (130 aa) |
| | EKE96665.1 | DNA-binding protein HU; KEGG: kol:Kole_0280 0.093 tRNA delta(2)-isopentenylpyrophosphate transferase K00791. (83 aa) |
| | EKE96792.1 | Primase 2; KEGG: sco:SCO3109 0.78 SCE41.18c; transcriptional-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 8.96. (1186 aa) |
| | secA | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (930 aa) |
| | EKE97054.1 | Putative PsaC; Photosystem I iron-sulfur protein; KEGG: drm:Dred_3277 0.0024 glycyl-radical activating family protein; K04069 pyruvate formate lyase activating enzyme; Psort location: CytoplasmicMembrane, score: 10.00. (54 aa) |
| | EKF02672.1 | Bacterial transferase hexapeptide repeat protein; KEGG: cgl:NCgl0119 1.0e-30 cgl0120; carbonic anhydrase/acetyltransferase. (191 aa) |
| | psbY | Photosystem II protein Y; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family. (41 aa) |
| | EKF03022.1 | Oxidoreductase NAD-binding domain protein; KEGG: npu:Npun_R2751 7.5e-202 oxidoreductase FAD/NAD(P)-binding subunit K02641; Psort location: CytoplasmicMembrane, score: 9.82. (427 aa) |
| | rpsB | Ribosomal protein S2; KEGG: afu:AF1100 0.11 cdhA-1; acetyl-CoA decarbonylase/synthase complex subunit alpha K00192; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family. (264 aa) |
| | lpxD | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (343 aa) |
| | psaA | Photosystem I P700 apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. (752 aa) |
| | psaB | Photosystem I P700 apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. (741 aa) |
| | EKF03171.1 | Putative ribulose-bisphosphate; KEGG: ava:Ava_3903 6.6e-187 ribulose 1,5-bisphosphate carboxylase small subunit K01602; Psort location: Cytoplasmic, score: 8.96. (424 aa) |
| | EKF03157.1 | Hypothetical protein; KEGG: chy:CHY_1072 0.64 purS; phosphoribosylformylglycinamidine synthase, PurS protein; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 8.96. (110 aa) |
| | petG | Cytochrome b6-F complex subunit PetG; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex. (37 aa) |
| | ccsA | Cytochrome c-type biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (351 aa) |
| | psbX | Photosystem II protein X; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II. (39 aa) |
| | rpmB | Ribosomal protein L28; KEGG: bce:BC3926 0.95 ATP-dependent protease La K07177; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | psbN | Photosystem II protein; May play a role in photosystem I and II biogenesis. Belongs to the PsbN family. (43 aa) |
| | psbH | Photosystem II phosphoprotein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (67 aa) |
| | rpsU-2 | Ribosomal protein S21; KEGG: sew:SeSA_A3399 2.7e-07 rpsU; 30S ribosomal protein S21 K02970; Belongs to the bacterial ribosomal protein bS21 family. (82 aa) |
| | topA-2 | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] (727 aa) |
| | petA | Plastoquinol--plastocyanin; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (333 aa) |
| | petC | Tat pathway signal sequence; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (179 aa) |
| | gyrA | DNA topoisomerase; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (866 aa) |
| | EKE97639.1 | Allophycocyanin beta subunit; KEGG: pth:PTH_0270 0.76 paaJ; acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase. (169 aa) |
| | EKE97504.1 | Hypothetical protein; KEGG: nme:NMB1031 0.99 leuB; 3-isopropylmalate dehydrogenase K00052; Psort location: Cytoplasmic, score: 8.96. (102 aa) |
| | EKE98063.1 | Hypothetical protein; KEGG: tet:TTHERM_00684550 4.8e-06 Protein kinase domain containing protein; K08286 protein-serine/threonine kinase; Psort location: Cytoplasmic, score: 8.96. (834 aa) |
| | EKE97888.1 | KEGG: pab:PAB1128 1.3e-21 polI; DNA polymerase I; K02319 DNA polymerase I; Psort location: Cytoplasmic, score: 8.96. (605 aa) |
| | EKE98349.1 | Hypothetical protein; KEGG: tet:TTHERM_00683180 0.50 DNA repair helicase; K11273 chromosome transmission fidelity protein 1. (1173 aa) |
| | EKE98337.1 | KEGG: ava:Ava_B0112 5.5e-112 recombination factor protein RarA/unknown domain fusion protein K07478; Psort location: Cytoplasmic, score: 8.96. (274 aa) |
| | EKE98336.1 | Hypothetical protein; KEGG: ava:Ava_B0112 6.4e-141 recombination factor protein RarA/unknown domain fusion protein K07478. (412 aa) |
| | EKE98190.1 | Hypothetical protein; KEGG: eic:NT01EI_0101 0.81 putative N-acetylmannosaminyltransferase K02852; Psort location: Cytoplasmic, score: 8.96. (255 aa) |
| | EKE98189.1 | DNA primase/polymerase; KEGG: cju:C8J_0656 0.22 pta; phosphate acetyltransferase; K00625 phosphate acetyltransferase K06873; Psort location: Cytoplasmic, score: 8.96. (529 aa) |
| | rpsU | Ribosomal protein S21; KEGG: sew:SeSA_A3399 8.3e-06 rpsU; 30S ribosomal protein S21 K02970; Belongs to the bacterial ribosomal protein bS21 family. (62 aa) |
| | EKE98149.1 | Primase 2; KEGG: spl:Spea_1184 0.996 pyrG; CTP synthetase K01937; Psort location: Cytoplasmic, score: 8.96. (1186 aa) |
| | EKE98265.1 | Hypothetical protein; KEGG: mba:Mbar_A2506 0.034 exosome complex exonuclease 1 K11600; Psort location: Cytoplasmic, score: 8.96. (325 aa) |
| | EKE96307.1 | KEGG: bba:Bd0301 0.99 hypothetical protein K00936; Psort location: Cytoplasmic, score: 8.96. (1166 aa) |
| | EKE98477.1 | KEGG: npu:Npun_R5750 1.7e-115 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97. (250 aa) |
| | ndhO | Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (71 aa) |
| | psaE | Photosystem I reaction center protein; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. (70 aa) |
| | psb28 | Photosystem II protein W; KEGG: efa:EF0059 0.60 glmU; UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional protein GlmU; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the Psb28 family. (111 aa) |
| | EKE98502.1 | Hypothetical protein; KEGG: tcx:Tcr_1347 0.059 glutamate--ammonia ligase K01915; Psort location: CytoplasmicMembrane, score: 10.00. (103 aa) |
| | EKE98576.1 | Hypothetical protein; KEGG: ajs:Ajs_3012 0.010 lipopolysaccharide biosynthesis K08252; Psort location: Periplasmic, score: 9.83. (280 aa) |
| | EKE98771.1 | Carbon dioxide concentrating protein; KEGG: psa:PST_3216 0.068 acetyl-CoA carboxylase, biotin carboxylase, putative; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit. (115 aa) |
| | EKE98770.1 | Carbon dioxide concentrating protein; KEGG: rsq:Rsph17025_0655 0.10 2-octaprenyl-6-methoxyphenyl hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase. (103 aa) |
| | EKE98828.1 | KEGG: lwe:lwe1961 9.5e-05 protein-tyrosine/serine phosphatase, putative K01104. (117 aa) |
| | EKE98798.1 | Hypothetical protein; KEGG: npu:Npun_F1420 2.2e-28 carbonic anhydrase K01673. (97 aa) |
| | EKE98797.1 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (184 aa) |
| | ftsH-2 | ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (645 aa) |
| | EKE98892.1 | KEGG: npu:Npun_R5406 4.4e-103 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97. (241 aa) |
| | EKE96376.1 | Hypothetical protein; KEGG: vfi:VF_0751 0.0089 holA; DNA polymerase III subunit delta K02340. (122 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (430 aa) |
| | EKE99239.1 | TypeII site-specific deoxyribonuclease; KEGG: mea:Mex_2p0396 0.00010 putative DNA methylase N-4/N-6; Psort location: Cytoplasmic, score: 8.96. (292 aa) |
| | rpmA | Ribosomal protein L27; KEGG: rca:Rcas_4308 0.62 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; K00860 adenylylsulfate kinase K00958; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family. (93 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (128 aa) |
| | ndhJ | NADH dehydrogenase, subunit C; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (174 aa) |
| | ndhK | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family. (245 aa) |
| | ndhC | NADH dehydrogenase subunit A; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (120 aa) |
| | psbE | Cytochrome b559 alpha subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (82 aa) |
| | psbF | Cytochrome b559 beta subunit; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (45 aa) |
| | psbJ | PsbJ protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (39 aa) |
| | psaI | Photosystem I reaction center; May help in the organization of the PsaL subunit. Belongs to the PsaI family. (46 aa) |
| | EKE99016.1 | KEGG: cyn:Cyan7425_4965 3.8e-65 transferase hexapeptide repeat containing protein; K03818 putative colanic acid biosynthesis acetyltransferase WcaF. (180 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (125 aa) |
| | EKF03302.1 | Hypothetical protein; KEGG: tva:TVAG_066800 0.18 Ubiquitin-conjugating enzyme family protein; K10578 ubiquitin-conjugating enzyme E2 J1; Psort location: Cytoplasmic, score: 8.96. (324 aa) |
| | EKF03248.1 | Allophycocyanin alpha subunit; KEGG: hor:Hore_17860 0.49 ATP synthase F0, C subunit K02110. (161 aa) |
| | EKF03246.1 | Orange carotenoid-binding protein; KEGG: cti:RALTA_B0406 0.00020 steroid delta-isomerase K01822; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the orange carotenoid-binding protein family. (319 aa) |
| | EKF03327.1 | Crp family transcriptional regulator; KEGG: edi:EDI_340750 0.98 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 8.96. (329 aa) |
| | EKF03314.1 | Hypothetical protein; KEGG: cja:CJA_0651 0.044 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96. (356 aa) |
| | EKF03351.1 | Phycocyanin-associated protein; KEGG: cyp:PCC8801_2543 4.1e-11 oxidoreductase FAD/NAD(P)-binding domain protein; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (51 aa) |
| | EKF03349.1 | Phycobilisome rod-core linker; KEGG: ctc:CTC00194 0.084 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Belongs to the phycobilisome linker protein family. (288 aa) |
| | EKF03347.1 | Phycobilisome rod-core linker protein; KEGG: dme:Dmel_CG14529 0.82 CG14529 gene product from transcript CG14529-RA; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (271 aa) |
| | EKF03346.1 | Phycocyanin alpha subunit; KEGG: rpf:Rpic12D_1629 0.54 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455. (163 aa) |
| | EKF03345.1 | Phycocyanin beta subunit; KEGG: mpu:MYPU_2670 0.15 atpG; F0F1 ATP synthase subunit gamma K02115. (173 aa) |
| | ndhD-2 | Proton-translocating NADH-quinone oxidoreductase, chain M; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family. (562 aa) |
| | EKF03436.1 | Hypothetical protein; KEGG: rcm:A1E_05125 0.99 dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase. (259 aa) |
| | EKF03610.1 | KEGG: npu:Npun_F4197 9.7e-51 ribulose bisphosphate carboxylase, small chain RbcS K01602. (109 aa) |
| | EKF03609.1 | RbcX protein; KEGG: mmu:381204 0.35 Naaladl1; N-acetylated alpha-linked acidic dipeptidase-like 1 K01301. (165 aa) |
| | cbbL | Ribulose bisphosphate carboxylase large chain protein; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. (476 aa) |
| | EKF03599.1 | SpoVR like family protein; KEGG: rxy:Rxyl_1578 0.994 3-oxoadipate enol-lactonase K01055. (191 aa) |
| | thf1 | Hypothetical protein; May be involved in photosynthetic membrane biogenesis. (202 aa) |
| | ndhD | Proton-translocating NADH-quinone oxidoreductase, chain M; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family. (524 aa) |
| | psbC | Photosystem II apoprotein P6; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (462 aa) |
| | psbD | Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (351 aa) |
| | ycf4 | Photosystem I assembly protein Ycf4; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family. (197 aa) |
| | EKF03701.1 | Putative DNA repair ATPase; KEGG: edi:EDI_192260 5.6e-14 eukaryotic translation initiation factor 3 subunit; Psort location: Cytoplasmic, score: 8.96. (359 aa) |
| | psb27 | Photosystem II protein Z; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster. (133 aa) |
| | EKF03838.1 | Single strand DNA binding protein; KEGG: mgi:Mflv_1281 4.5e-06 DNA polymerase III subunits gamma and tau K02343. (177 aa) |
| | EKF03810.1 | Hypothetical protein; KEGG: tel:tsr0706 1.1e-10 ndhL; NADH dehydrogenase subunit; K05583 NADH dehydrogenase I subunit L. (39 aa) |
| | psaM | Photosystem I reaction center subunit XII; Psort location: CytoplasmicMembrane, score: 9.82. (36 aa) |
| | EKF03773.1 | Hypothetical protein; KEGG: kra:Krad_1266 0.0023 ATP synthase F0, B subunit; K02109 F-type H+-transporting ATPase subunit b. (108 aa) |
| | EKF03752.1 | Putative photosystem I reaction protein; KEGG: fnu:FN1592 0.52 Na(+)-translocating NADH-quinone reductase subunit D K03617; Psort location: CytoplasmicMembrane, score: 9.82. (62 aa) |
| | EKF04160.1 | Photosystem II Q(b) protein; KEGG: bfr:BF0289 0.79 hppA; membrane-bound proton-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the reaction center PufL/M/PsbA/D family. (220 aa) |
| | petJ-2 | Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (111 aa) |
| | EKF04482.1 | Hypothetical protein; KEGG: syf:Synpcc7942_1524 0.76 DNA-directed RNA polymerase subunit beta' K03046. (76 aa) |
| | EKF05389.1 | Allophycocyanin; KEGG: amt:Amet_3605 0.98 alanine--glyoxylate transaminase K00839. (161 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (109 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (202 aa) |
| | rplS | Ribosomal protein L19 splS; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (120 aa) |
| | secE | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (73 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (238 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (183 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (128 aa) |
| | ftsH | ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (628 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (127 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (132 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (105 aa) |
| | EKF05054.1 | ATP-dependent Clp protease adaptor protein ClpS; KEGG: saz:Sama_0190 0.91 selenide, water dikinase; K01008 selenide, water dikinase; Belongs to the ClpS family. (63 aa) |
| | psaL | Photosystem I reaction center; KEGG: car:cauri_1558 0.84 cdsA; phosphatidate cytidylyltransferase K00981. (171 aa) |
| | psaJ | Photosystem I reaction center; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. (49 aa) |
| | EKF05001.1 | Photosystem I reaction center; KEGG: mar:MAE_11850 0.53 gmk; guanylate kinase; K00942 guanylate kinase. (164 aa) |
| | petM | Cytochrome b6-f complex subunit VII; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (34 aa) |
| | kaiC | Circadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. (520 aa) |
| | EKF04672.1 | Hypothetical protein; KEGG: sat:SYN_01800 0.015 ribosomal large subunit pseudouridine synthase D K06180; Psort location: Cytoplasmic, score: 8.96. (259 aa) |
| | priA | Primosomal replication protein N prime; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (844 aa) |
| | petJ | Cytochrome c class I; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (111 aa) |
| | psbA-2 | Photosystem II Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa) |
| | psbA | Photosystem II Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (361 aa) |
| | EKF05799.1 | Putative CRISPR-associated protein; KEGG: dvu:DVU3350 0.998 iron-sulfur cluster-binding protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta; overlaps another CDS with the same product name. (242 aa) |
| | EKF05795.1 | Putative CRISPR-associated protein; KEGG: cbe:Cbei_4533 0.45 PTS system, glucose subfamily, IIA subunit; K02763 PTS system, D-glucosamine-specific IIA component. (287 aa) |
| | EKF05793.1 | Putative CRISPR-associated protein; KEGG: pcl:Pcal_1787 0.97 S-adenosyl-L-homocysteine hydrolase K01251. (318 aa) |
| | EKF05791.1 | Putative CRISPR-associated RAMP; KEGG: reu:Reut_A1271 0.51 3-hydroxybutyrate dehydrogenase K00019. (273 aa) |
| | gyrB | DNA topoisomerase; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (645 aa) |
| | EKF05640.1 | Photosystem I reaction center; KEGG: sdn:Sden_1559 0.998 phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 9.82. (63 aa) |
| | psbU | Photosystem II extrinsic protein; Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation. (141 aa) |
| | EKF05618.1 | Carbon dioxide concentrating; KEGG: pag:PLES_44131 0.42 alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase. (112 aa) |
| | EKF05614.1 | Hypothetical protein; KEGG: bur:Bcep18194_A4822 0.97 precorrin-2 C(20)-methyltransferase K00593. (194 aa) |
| | EKF05543.1 | Hypothetical protein; KEGG: pna:Pnap_4374 0.86 deoxyribonuclease I K01150. (154 aa) |
| | rimM | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (208 aa) |
| | ndhH | NAD(P)H-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (394 aa) |
| | EKF05955.1 | Hypothetical protein; KEGG: pmx:PERMA_1427 7.4e-08 ADP-ribosylglycohydrolase; K05521 ADP-ribosylglycohydrolase; Psort location: CytoplasmicMembrane, score: 9.82. (322 aa) |
| | EKF05924.1 | Hypothetical protein; KEGG: amt:Amet_1709 0.12 PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C; Psort location: Cytoplasmic, score: 8.96. (402 aa) |
| | EKF06193.1 | Peptidase; KEGG: npu:Npun_R0309 1.1e-179 carboxyl-terminal protease K03797; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S41A family. (418 aa) |
| | petD | Cytochrome b6-f complex subunit IV; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa) |
| | EKF06074.1 | Hypothetical protein; KEGG: rso:RS02346 1.1e-10 RSp1012; putative acyl transferase protein K00680; Psort location: CytoplasmicMembrane, score: 10.00. (204 aa) |
| | EKE99304.1 | Hypothetical protein; KEGG: eat:EAT1b_1725 0.67 DNA gyrase, A subunit K02469; Belongs to the UPF0145 family. (108 aa) |
| | ndhM | NADH dehydrogenase I subunit M; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (164 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (100 aa) |
| | recR | Recombination protein R; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (115 aa) |
| | EKE99562.1 | KEGG: xfa:XF0928 0.070 hypothetical protein; K03500 ribosomal RNA small subunit methyltransferase B. (977 aa) |
| | EKE96425.1 | Hypothetical protein; KEGG: npu:Npun_R5611 0.74 multi-sensor hybrid histidine kinase. (1298 aa) |
| | EKE99840.1 | Ribosomal protein S1; KEGG: hor:Hore_10450 1.3e-34 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. (284 aa) |
| | rpmF | Ribosomal protein L32; KEGG: bra:BRADO5576 0.031 folA; dihydrofolate reductase K00287; Belongs to the bacterial ribosomal protein bL32 family. (58 aa) |
| | EKE99775.1 | Replicative DNA helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (627 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (152 aa) |
| | psbA-5 | Photosystem Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (324 aa) |
| | ndhA | NADH dehydrogenase; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. (372 aa) |
| | ndhI | NADH-plastoquinone oxidoreductase, I subunit; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family. (194 aa) |
| | ndhE | NADH dehydrogenase subunit K; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (101 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | rpmI | Ribosomal protein L35; KEGG: spu:578658 0.29 similar to Methyl-CpG binding domain protein 4; K10801 methyl-CpG-binding domain protein 4; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL35 family. (75 aa) |
| | psbI | PsbI protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (38 aa) |
| | EKF00109.1 | Phycobilisome rod-core linker protein; KEGG: cpf:CPF_0460 0.40 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (251 aa) |
| | ycf12 | Hypothetical protein; A core subunit of photosystem II (PSII); Belongs to the Ycf12 family. (43 aa) |
| | EKF00059.1 | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; KEGG: ana:alr2361 0. mannose-1-phosphate guanyltransferase; K00966 mannose-1-phosphate guanylyltransferase K01840; Psort location: Cytoplasmic, score: 9.97. (843 aa) |
| | rpmH | Ribosomal protein L34; KEGG: rak:A1C_04775 6.3e-08 rpmH; 50S ribosomal protein L34 K02914; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | atpD | H(+)-transporting ATPase F(1) beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (482 aa) |
| | atpC | H(+)-transporting ATPase F; Produces ATP from ADP in the presence of a proton gradient across the membrane. (151 aa) |
| | EKF00208.1 | ADP-ribosylglycohydrolase; KEGG: npu:Npun_R0816 1.4e-143 ADP-ribosylation/crystallin J1 K05521. (313 aa) |
| | EKF00444.1 | Photosystem I reaction center; KEGG: fre:Franean1_1984 0.91 ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH; Psort location: CytoplasmicMembrane, score: 9.82. (45 aa) |
| | ndhB | Proton-translocating NADH-quinone oxidoreductase, chain; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (520 aa) |
| | psbV | Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. (163 aa) |
| | EKF00422.1 | Putative cytochrome c550, psbV; KEGG: bac:BamMC406_5601 0.14 gluconate 2-dehydrogenase (acceptor); Psort location: CytoplasmicMembrane, score: 9.82. (165 aa) |
| | petE | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. (138 aa) |
| | psbZ | Photosystem II protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa) |
| | ccsB | ResB-like family protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (465 aa) |
| | EKF00375.1 | ADP-ribosylglycohydrolase; KEGG: npu:Npun_F4650 3.4e-119 ADP-ribosylation/crystallin J1; K05521 ADP-ribosylglycohydrolase; Psort location: Cytoplasmic, score: 8.96. (278 aa) |
| | EKF00354.1 | Carbon dioxide concentrating protein; KEGG: lxx:Lxx07010 0.052 atpF; F0F1 ATP synthase subunit B K02109. (102 aa) |
| | EKF00353.1 | Carbon dioxide concentrating; KEGG: mno:Mnod_0506 0.028 penicillin-binding protein, 1A family; Psort location: Cytoplasmic, score: 8.96. (114 aa) |
| | EKF00352.1 | Carbon dioxide concentrating protein; KEGG: art:Arth_2766 0.98 uroporphyrinogen-III synthase K01719. (100 aa) |
| | EKF00351.1 | KEGG: npu:Npun_F4294 9.4e-243 ribulose bisphosphate carboxylase, small chain. (552 aa) |
| | EKF00349.1 | Carbon dioxide concentrating protein; KEGG: acb:A1S_1692 0.057 tryptophan synthase subunit beta K06001. (260 aa) |
| | EKF00283.1 | Iron-sulfur cluster-binding family protein; KEGG: ppu:PP_1332 0.99 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase K01928; Psort location: Cytoplasmic, score: 8.96. (323 aa) |
| | ycf3 | Photosystem I assembly protein; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf3 family. (173 aa) |
| | EKF00451.1 | Hypothetical protein; KEGG: cbc:CbuK_1404 0.21 adk; adenylate kinase K00939; Belongs to the SOS response-associated peptidase family. (227 aa) |
| | ndhD-3 | Proton-translocating NADH-quinone oxidoreductase, chain M; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family. (537 aa) |
| | EKF00710.1 | Hypothetical protein; KEGG: ava:Ava_2796 1.5e-61 NAD(P)H-quinone oxidoreductase subunit 4 K05575. (146 aa) |
| | ftsH-3 | ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (612 aa) |
| | EKF00632.1 | Ribosomal protein L25; KEGG: aga:AgaP_AGAP010427 0.16 AGAP010427-PA; K00654 serine palmitoyltransferase; Belongs to the bacterial ribosomal protein bL25 family. (99 aa) |
| | psbM | PsbM, photosystem II reaction center protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. (38 aa) |
| | psbK | Putative photosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (45 aa) |
| | EKF00561.1 | PsaJ, photosystem I reaction centre subunit IX; KEGG: gvi:gll2805 0.53 succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+); Psort location: CytoplasmicMembrane, score: 9.82. (49 aa) |
| | EKF00819.1 | Phycobilisome linker polypeptide; KEGG: rrs:RoseRS_2729 0.67 hypothetical protein; K03534 L-rhamnose mutarotase; Psort location: Cytoplasmic, score: 8.96. (193 aa) |
| | EKF00791.1 | Hypothetical protein; KEGG: ame:725613 0.70 similar to Serine-protein kinase ATM (Ataxia telangiectasia mutated homolog) (A-T, mutated homolog); K04728 ataxia telangectasia mutated family protein. (108 aa) |
| | EKF00790.1 | Orange carotenoid-binding protein; KEGG: sgr:SGR_6072 7.4e-06 putative ketosteroid isomerase; K01822 steroid delta-isomerase; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the orange carotenoid-binding protein family. (319 aa) |
| | EKF00742.1 | Putative replicative DNA protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (456 aa) |
| | EKF00957.1 | Phycobilisome linker polypeptide protein; KEGG: bxe:Bxe_A0988 0.93 ADP-glyceromanno-heptose 6-epimerase precursor K03274; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (251 aa) |
| | EKF00956.1 | Putative phycocyanin-associated phycobilisome linker protein CpcD; KEGG: ana:all4121 8.2e-20 petH; ferredoxin--NADP(+) reductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (93 aa) |
| | EKF00931.1 | Hypothetical protein; KEGG: kpe:KPK_4546 0.65 uppS; undecaprenyl pyrophosphate synthase K00806; Psort location: Cytoplasmic, score: 8.96. (147 aa) |
| | EKF01033.1 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (200 aa) |
| | EKF01112.1 | ATP-dependent helicase RecQ; KEGG: npu:Npun_F0932 4.3e-215 ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ; Psort location: CytoplasmicMembrane, score: 8.46. (504 aa) |
| | glmU | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (452 aa) |
| | EKF01076.1 | Gas vesicle protein; KEGG: osa:4325801 0.35 Os01g0132800; hypothetical protein; K01056 peptidyl-tRNA hydrolase, PTH1 family; Psort location: Cytoplasmic, score: 9.26. (71 aa) |
| | gvpA-2 | Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (71 aa) |
| | EKF01074.1 | Gas vesicle protein GvpC repeat protein; KEGG: spu:583203 4.2e-05 hypothetical LOC583203; K10667 E3 ubiquitin-protein ligase RNF8; Psort location: Cytoplasmic, score: 9.26. (177 aa) |
| | EKF01072.1 | Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (121 aa) |
| | EKF01071.1 | Gas vesicle protein K; KEGG: pfo:Pfl01_0569 0.82 (acyl-carrier protein) phosphodiesterase K01118; Psort location: Cytoplasmic, score: 8.96. (160 aa) |
| | EKF01189.1 | Squalene-hopene cyclase; KEGG: npu:Npun_R6245 0. squalene/oxidosqualene cyclase K06045; Psort location: CytoplasmicMembrane, score: 9.82. (639 aa) |
| | EKF01158.1 | KEGG: ccs:CCNA_01144 1.1e-05 cytochrome c oxidase polypeptide II. (133 aa) |
| | psbA-4 | Photosystem II Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa) |
| | rpsO | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | EKF01261.1 | Hypothetical protein; KEGG: pmu:PM1806 0.997 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042. (148 aa) |
| | rpsP | Ribosomal protein S16; KEGG: xac:XAC1808 0.0029 aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+); Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS16 family. (87 aa) |
| | rpsU-6 | Ribosomal protein S21; KEGG: sew:SeSA_A3399 4.8e-10 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS21 family. (58 aa) |
| | lpxA | acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (272 aa) |
| | EKF01209.1 | Hypothetical protein; KEGG: pap:PSPA7_1244 0.35 rhl; ATP-dependent RNA helicase RhlB; K03732 ATP-dependent RNA helicase RhlB. (66 aa) |
| | EKF01401.1 | Phycoerythrocyanin-associated protein; KEGG: cli:Clim_0029 0.34 F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (252 aa) |
| | EKF01400.1 | Phycoerythrocyanin-associated protein; KEGG: mgm:Mmc1_0129 0.998 type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (249 aa) |
| | EKF01398.1 | Phycocerrythrocyanin-associated protein; KEGG: cyt:cce_0994 0.0055 petH; ferredoxin-NADP oxidoreductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family. (286 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (475 aa) |
| | EKF01360.1 | Hypothetical protein; KEGG: ava:Ava_3790 5.9e-67 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96. (159 aa) |
| | EKF01447.1 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (115 aa) |
| | EKF01680.1 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (246 aa) |
| | clpS | ATP-dependent Clp protease; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (101 aa) |
| | smc | Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1226 aa) |
| | gvpA | Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (71 aa) |
| | EKF01783.1 | C-phycoerythrin alpha subunit; KEGG: npu:Npun_F2351 2.0e-06 glutathione S-transferase-like protein. (164 aa) |
| | EKF01782.1 | C-phycoerythrin beta subunit; KEGG: ach:Achl_0940 0.39 methylmalonate-semialdehyde dehydrogenase; K00140 methylmalonate-semialdehyde dehydrogenase. (184 aa) |
| | rplL-2 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (126 aa) |
| | rpsU-5 | Ribosomal protein S21; KEGG: sew:SeSA_A3399 4.0e-06 rpsU; 30S ribosomal protein S21 K02970; Belongs to the bacterial ribosomal protein bS21 family. (77 aa) |
| | EKF01957.1 | Hypothetical protein; KEGG: eci:UTI89_C0527 0.93 ybbN; putative thioredoxin-like protein K05838. (212 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (71 aa) |
| | EKE96440.1 | KEGG: pmo:Pmob_0065 0.41 RnfA-Nqr electron transport subunit; K00350 Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the reaction center PufL/M/PsbA/D family. (239 aa) |
| | EKE96469.1 | Replicative DNA helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (456 aa) |
| | EKF02379.1 | Phycocyanin alpha subunit; KEGG: cak:Caul_2415 0.96 alpha-N-arabinofuranosidase. (162 aa) |
| | EKF02378.1 | Phycocyanin beta subunit; KEGG: sil:SPO0923 0.37 carB; carbamoyl phosphate synthase large subunit K01955. (172 aa) |
| | EKF02375.1 | Phycocyanin-associated protein; KEGG: mar:MAE_12570 1.2e-15 petH; ferredoxin-NADP oxidoreductase; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82. (85 aa) |
| | EKF02374.1 | Phycocyanin-associated protein; KEGG: cyn:Cyan7425_5047 0.18 oxidoreductase FAD/NAD(P)-binding domain protein; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (289 aa) |
| | EKF02373.1 | Phycocyanin-associated protein; KEGG: aae:aq_642 0.86 RNA 3'-terminal-phosphate cyclase K01974; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family. (269 aa) |
| | EKF02372.1 | Phycocyanin alpha subunit; KEGG: lpl:lp_0251 0.46 selA; L-seryl-tRNA(sec) selenium transferase (putative) K01042. (162 aa) |
| | EKF02371.1 | Phycocyanin beta subunit; KEGG: xom:XOO_3079 0.55 trpA; tryptophan synthase subunit alpha K01695. (172 aa) |
| | EKF02362.1 | Allophycocyanin-associated protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (68 aa) |
| | EKF02361.1 | Allophycocyanin beta subunit; KEGG: mdi:METDI3402 0.95 putative L-aspartate oxidase (NadB-like) K00278. (162 aa) |
| | EKF02360.1 | Allophycocyanin alpha subunit; KEGG: rba:RB2661 0.62 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075; Psort location: Cytoplasmic, score: 8.96. (161 aa) |
| | EKF02358.1 | Phycobilisome linker protein ApcE; KEGG: cak:Caul_4567 0.96 truA; tRNA pseudouridine synthase A K06173; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the phycobilisome linker protein family. (1079 aa) |
| | atpB | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (254 aa) |
| | atpE | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (81 aa) |
| | atpG-2 | F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria. Belongs to the ATPase B chain family. (143 aa) |
| | atpF | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (185 aa) |
| | atpH | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (184 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (506 aa) |
| | atpG | H(+)-transporting two-sector ATPase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (315 aa) |
| | rpsU-4 | KEGG: sew:SeSA_A3399 1.5e-06 rpsU; 30S ribosomal protein S21 K02970; Belongs to the bacterial ribosomal protein bS21 family. (64 aa) |
| | psbA-3 | Photosystem Q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (324 aa) |
| | ndhN | Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration. (158 aa) |
| | rplC | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (211 aa) |
| | rplD | Ribosomal protein L4; Forms part of the polypeptide exit tunnel. (210 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (104 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (287 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (118 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (253 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (125 aa) |
| | rpmC | Ribosomal protein L29; KEGG: mgm:Mmc1_3676 0.066 ATP synthase F0, B subunit; K02109 F-type H+-transporting ATPase subunit b; Belongs to the universal ribosomal protein uL29 family. (75 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (83 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (116 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (182 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (133 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (182 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (175 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (148 aa) |
| | secY | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (437 aa) |
| | rpmJ | Ribosomal protein L36; KEGG: cag:Cagg_2818 0.94 deoxyribose-phosphate aldolase K01619; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (126 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (131 aa) |
| | rplQ | Ribosomal protein L17; KEGG: bxe:Bxe_B1353 0.065 putative acetyltransferase protein K00680; Psort location: Cytoplasmic, score: 9.97. (116 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (158 aa) |
| | rpsI | Ribosomal protein S9; KEGG: pmx:PERMA_1161 0.88 lon; ATP-dependent protease La K01338; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uS9 family. (139 aa) |
| | rpmE | Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (79 aa) |
| | recO | Recombination protein O; Involved in DNA repair and RecF pathway recombination. (305 aa) |
| | EKF02181.1 | Hypothetical protein; KEGG: mex:Mext_2986 0.98 fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase). (215 aa) |
| | EKF02616.1 | Cytochrome c; KEGG: sde:Sde_2419 3.8e-05 cytochrome c oxidase, cbb3-type, subunit III; K00406 cb-type cytochrome c oxidase subunit III. (115 aa) |
| | EKF02524.1 | Cyanobacterial ribosomal protein Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. (99 aa) |
| | EKE96524.1 | Type II site-specific deoxyribonuclease restriction subunit; KEGG: msy:MS53_0154 0.35 pepA; leucyl aminopeptidase K01255; Psort location: Cytoplasmic, score: 8.96. (295 aa) |
| | rpsU-3 | Ribosomal protein S21; KEGG: sew:SeSA_A3399 4.0e-06 rpsU; 30S ribosomal protein S21 K02970; Belongs to the bacterial ribosomal protein bS21 family. (62 aa) |
| | EKE96619.1 | Ribosomal protein S1; KEGG: fal:FRAAL1781 2.5e-45 rpsA; 30S ribosomal protein S1 K02945; Psort location: Cytoplasmic, score: 9.97. (338 aa) |
| | psbT | Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. (34 aa) |
