Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APB32853.1 | APB33909.1 | GlitD10_0539 | GlitD10_1585 | Penicillin-binding protein, 1A family. | Penicillin-binding protein. | 0.678 |
| APB32853.1 | ftsI | GlitD10_0539 | GlitD10_1468 | Penicillin-binding protein, 1A family. | Penicillin-binding protein. | 0.757 |
| APB32853.1 | mraY | GlitD10_0539 | GlitD10_0563 | Penicillin-binding protein, 1A family. | Phospho-N-acetylmuramoyl- pentapeptidetransferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.637 |
| APB32853.1 | mrdA | GlitD10_0539 | GlitD10_0712 | Penicillin-binding protein, 1A family. | Penicillin-binding Protein dimerization domain family. | 0.889 |
| APB32853.1 | mrdB | GlitD10_0539 | GlitD10_1106 | Penicillin-binding protein, 1A family. | Cell cycle protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.675 |
| APB32853.1 | murA | GlitD10_0539 | GlitD10_1011 | Penicillin-binding protein, 1A family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.607 |
| APB32853.1 | murC | GlitD10_0539 | GlitD10_2468 | Penicillin-binding protein, 1A family. | UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.704 |
| APB32853.1 | murD | GlitD10_0539 | GlitD10_0903 | Penicillin-binding protein, 1A family. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.493 |
| APB32853.1 | murE | GlitD10_0539 | GlitD10_2047 | Penicillin-binding protein, 1A family. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.538 |
| APB32853.1 | murF | GlitD10_0539 | GlitD10_0309 | Penicillin-binding protein, 1A family. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.604 |
| APB32853.1 | murG | GlitD10_0539 | GlitD10_2293 | Penicillin-binding protein, 1A family. | N-acetylglucosaminyltransferase, MurG; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.623 |
| APB32853.1 | spoVE | GlitD10_0539 | GlitD10_2947 | Penicillin-binding protein, 1A family. | Putative cell division protein ftsW; Belongs to the SEDS family. | 0.642 |
| APB33909.1 | APB32853.1 | GlitD10_1585 | GlitD10_0539 | Penicillin-binding protein. | Penicillin-binding protein, 1A family. | 0.678 |
| APB33909.1 | ftsI | GlitD10_1585 | GlitD10_1468 | Penicillin-binding protein. | Penicillin-binding protein. | 0.757 |
| APB33909.1 | mraY | GlitD10_1585 | GlitD10_0563 | Penicillin-binding protein. | Phospho-N-acetylmuramoyl- pentapeptidetransferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.660 |
| APB33909.1 | mrdA | GlitD10_1585 | GlitD10_0712 | Penicillin-binding protein. | Penicillin-binding Protein dimerization domain family. | 0.742 |
| APB33909.1 | mrdB | GlitD10_1585 | GlitD10_1106 | Penicillin-binding protein. | Cell cycle protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.539 |
| APB33909.1 | murA | GlitD10_1585 | GlitD10_1011 | Penicillin-binding protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.588 |
| APB33909.1 | murB | GlitD10_1585 | GlitD10_2469 | Penicillin-binding protein. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.430 |
| APB33909.1 | murC | GlitD10_1585 | GlitD10_2468 | Penicillin-binding protein. | UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.726 |
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