Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APB33182.1 | fmt | GlitD10_0866 | GlitD10_1427 | Hypothetical protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.479 |
| APB33182.1 | folD | GlitD10_0866 | GlitD10_0657 | Hypothetical protein. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.515 |
| APB33182.1 | purH | GlitD10_0866 | GlitD10_1265 | Hypothetical protein. | Bifunctional purine biosynthesis protein purH / phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.441 |
| APB33182.1 | purN | GlitD10_0866 | GlitD10_0022 | Hypothetical protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.446 |
| APB33695.1 | APB35139.1 | GlitD10_1374 | GlitD10_2796 | Hypothetical protein. | Glycine cleavage system aminomethyltransferase T. | 0.567 |
| APB33695.1 | fmt | GlitD10_1374 | GlitD10_1427 | Hypothetical protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.683 |
| APB33695.1 | folD | GlitD10_1374 | GlitD10_0657 | Hypothetical protein. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.626 |
| APB33695.1 | glyA | GlitD10_1374 | GlitD10_2917 | Hypothetical protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.722 |
| APB33695.1 | metF | GlitD10_1374 | GlitD10_2646 | Hypothetical protein. | Putative methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.604 |
| APB33695.1 | metH | GlitD10_1374 | GlitD10_0541 | Hypothetical protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.761 |
| APB33695.1 | purH | GlitD10_1374 | GlitD10_1265 | Hypothetical protein. | Bifunctional purine biosynthesis protein purH / phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.617 |
| APB33695.1 | purN | GlitD10_1374 | GlitD10_0022 | Hypothetical protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.633 |
| APB34304.1 | APB34305.1 | GlitD10_1978 | GlitD10_1979 | Urea carboxylase-associated protein 1. | Urea carboxylase-associated protein 2. | 0.694 |
| APB34305.1 | APB34304.1 | GlitD10_1979 | GlitD10_1978 | Urea carboxylase-associated protein 2. | Urea carboxylase-associated protein 1. | 0.694 |
| APB34989.1 | fmt | GlitD10_2647 | GlitD10_1427 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.634 |
| APB34989.1 | folD | GlitD10_2647 | GlitD10_0657 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.845 |
| APB34989.1 | purH | GlitD10_2647 | GlitD10_1265 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Bifunctional purine biosynthesis protein purH / phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.444 |
| APB34989.1 | purN | GlitD10_2647 | GlitD10_0022 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.596 |
| APB35139.1 | APB33695.1 | GlitD10_2796 | GlitD10_1374 | Glycine cleavage system aminomethyltransferase T. | Hypothetical protein. | 0.567 |
| APB35139.1 | fmt | GlitD10_2796 | GlitD10_1427 | Glycine cleavage system aminomethyltransferase T. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.690 |
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