STRINGSTRING
amiB-1 amiB-1 APB33917.1 APB33917.1 ppiB ppiB APB34199.1 APB34199.1 amiB-2 amiB-2 APB34618.1 APB34618.1 APB34619.1 APB34619.1 APB35127.1 APB35127.1 APB35192.1 APB35192.1 APB35197.1 APB35197.1 APB35204.1 APB35204.1 amiB-3 amiB-3 APB35302.1 APB35302.1 spoIID spoIID APB32370.1 APB32370.1 APB32475.1 APB32475.1 APB32589.1 APB32589.1 APB32621.1 APB32621.1 APB32628.1 APB32628.1 APB32637.1 APB32637.1 APB32797.1 APB32797.1 APB32798.1 APB32798.1 APB32979.1 APB32979.1 APB33100.1 APB33100.1 APB33120.1 APB33120.1 APB33204.1 APB33204.1 rlpA rlpA APB33301.1 APB33301.1 APB33303.1 APB33303.1 APB33304.1 APB33304.1 APB33362.1 APB33362.1 APB33408.1 APB33408.1 lpxA lpxA APB33513.1 APB33513.1 APB33566.1 APB33566.1 sugE sugE exbD exbD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amiB-1Cell wall hydrolase/autolysin. (567 aa)
APB33917.1Hypothetical protein. (276 aa)
ppiBPeptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (241 aa)
APB34199.1ErfK/YbiS/YcfS/YnhG family protein. (152 aa)
amiB-2N-acetylmuramoyl-L-alanine amidase. (611 aa)
APB34618.1Trypsin-like serine protease. (404 aa)
APB34619.1Serine protease. (335 aa)
APB35127.1Tetratricopeptide repeat-containing protein. (237 aa)
APB35192.1Putative integral membrane protein. (294 aa)
APB35197.1Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1028 aa)
APB35204.12-alkenal reductase. (401 aa)
amiB-3N-acetylmuramoyl-L-alanine amidase. (443 aa)
APB35302.1Spore germination protein. (193 aa)
spoIIDSpoIID/LytB domain protein. (379 aa)
APB32370.1Hypothetical protein. (297 aa)
APB32475.1Tetratricopeptide repeat-containing protein. (429 aa)
APB32589.1ABC-type uncharacterized transport systems, ATPase components. (874 aa)
APB32621.1Peptidase M61 domain-containing protein. (573 aa)
APB32628.1Hypothetical protein. (143 aa)
APB32637.1Tetratricopeptide repeat-containing protein. (202 aa)
APB32797.1Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (448 aa)
APB32798.1Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1065 aa)
APB32979.1Trypsin domain protein. (279 aa)
APB33100.1Cyclophilin type peptidyl-prolyl cis-trans isomerase. (400 aa)
APB33120.1Putative permease. (120 aa)
APB33204.1Hypothetical protein. (362 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (304 aa)
APB33301.1Peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein. (177 aa)
APB33303.1RND multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1088 aa)
APB33304.1RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (410 aa)
APB33362.1SpoIID/LytB domain protein. (275 aa)
APB33408.1Hypothetical protein. (105 aa)
lpxAacyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (290 aa)
APB33513.1Serine protease. (319 aa)
APB33566.1Protein of unknown function DUF928. (252 aa)
sugESmall multidrug resistance protein. (104 aa)
exbDBiopolymer transport protein. (133 aa)
Your Current Organism:
Gloeomargarita lithophora
NCBI taxonomy Id: 1188229
Other names: Candidatus Gloeomargarita lithophora D10, G. lithophora Alchichica-D10, Gloeomargarita lithophora Alchichica-D10, Gloeomargarita lithophora PMC 919.15
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