STRINGSTRING
GCA_000331575_01271 GCA_000331575_01271 GCA_000331575_01272 GCA_000331575_01272 GCA_000331575_01273 GCA_000331575_01273 GCA_000331575_01274 GCA_000331575_01274 GCA_000331575_02624 GCA_000331575_02624
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000331575_01271Unannotated protein. (364 aa)
GCA_000331575_01272Unannotated protein. (215 aa)
GCA_000331575_01273Unannotated protein. (397 aa)
GCA_000331575_01274Unannotated protein. (154 aa)
GCA_000331575_02624Unannotated protein. (363 aa)
Your Current Organism:
Bacillus oryziterrae
NCBI taxonomy Id: 1191699
Other names: B. oryziterrae, Bacillus oryziterrae Bao et al. 2017, Bacillus sp. ZYK, CGMCC 1.5179, DSM 26460, strain ZYK
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