STRINGSTRING
JBW_01647 JBW_01647 JBW_02716 JBW_02716 JBW_02717 JBW_02717 glmS-2 glmS-2 JBW_04747 JBW_04747 JBW_04748 JBW_04748 JBW_04749 JBW_04749
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JBW_01647TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: gltA, putative glutamate synthase (NADPH), homotetrameric. (468 aa)
JBW_02716PFAM: glutamine synthetase catalytic region; KEGG: glnA, putative glutamine synthetase. (633 aa)
JBW_02717KEGG: glnA1, glutamine synthetase GlnA; PFAM: Glutamine synthetase type III domain-containing protein, glutamine synthetase catalytic region. (697 aa)
glmS-2Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (609 aa)
JBW_04747KEGG: hypothetical protein; PFAM: glutamate synthase alpha subunit domain protein, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain. (768 aa)
JBW_04748KEGG: gltB, putative glutamate synthase (NADPH) large chain; PFAM: ferredoxin-dependent glutamate synthase, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; Belongs to the glutamate synthase family. (544 aa)
JBW_04749KEGG: hypothetical protein. (368 aa)
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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