STRINGSTRING
JBW_00155 JBW_00155 JBW_00694 JBW_00694 JBW_00695 JBW_00695 JBW_03516 JBW_03516 JBW_04424 JBW_04424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JBW_00155KEGG: algA, mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II, Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family. (460 aa)
JBW_00694TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II, Nucleotidyl transferase; KEGG: algA, mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. (458 aa)
JBW_00695PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I. (460 aa)
JBW_03516KEGG: mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I. (306 aa)
JBW_04424PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase; KEGG: algC, alginate biosynthesis protein AlgC. (457 aa)
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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