STRINGSTRING
JBW_00996 JBW_00996 JBW_01176 JBW_01176 JBW_02186 JBW_02186 JBW_02563 JBW_02563 JBW_02597 JBW_02597 JBW_02805 JBW_02805 JBW_02806 JBW_02806 JBW_03080 JBW_03080 JBW_04044 JBW_04044 JBW_04051 JBW_04051 JBW_04061 JBW_04061
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JBW_00996KEGG: hypothetical protein. (151 aa)
JBW_01176KEGG: hypothetical protein. (160 aa)
JBW_02186KEGG: hypothetical protein. (213 aa)
JBW_02563KEGG: hypothetical protein; PFAM: Protein of unknown function DUF3231. (341 aa)
JBW_02597KEGG: hypothetical protein. (183 aa)
JBW_02805KEGG: isoprenylcysteine carboxyl methyltransferase; PFAM: Isoprenylcysteine carboxyl methyltransferase. (177 aa)
JBW_02806KEGG: naringenin-chalcone synthase; PFAM: chalcone and stilbene synthase domain protein. (348 aa)
JBW_03080PFAM: Dynamin family protein; KEGG: dynamin family protein. (1220 aa)
JBW_04044KEGG: hypothetical protein. (207 aa)
JBW_04051KEGG: hypothetical protein. (186 aa)
JBW_04061PFAM: Protein of unknown function DUF3231; KEGG: hypothetical protein. (175 aa)
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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