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JBW_00201 JBW_00201 JBW_01646 JBW_01646 pyrR pyrR JBW_02534 JBW_02534 pyrE pyrE pyrF pyrF pyrD pyrD pyrK pyrK carB carB carA carA pyrC pyrC pyrB pyrB JBW_02850 JBW_02850 JBW_04057 JBW_04057 JBW_04262 JBW_04262
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JBW_00201TIGRFAM: xanthine permease, uracil-xanthine permease; KEGG: xanthine permease; PFAM: Xanthine/uracil/vitamin C permease. (429 aa)
JBW_01646PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein; KEGG: ferredoxin-NADP reductase. (284 aa)
pyrRBifunctional protein pyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. (183 aa)
JBW_02534KEGG: selenate reductase YgfK; TIGRFAM: selenate reductase YgfK; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain. (1092 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (190 aa)
pyrFOrotidine 5'-phosphate decarboxylase subfamily 1 core; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (239 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. (307 aa)
pyrKDihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (255 aa)
carBSMART: Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein; HAMAP : Carbamoyl-phosphate synthase large subunit glutamine-dependent; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding protein, Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein, Carbamoyl-phosphate synthetase large chain domain protein; KEGG: carB, putative carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. (1073 aa)
carAHAMAP : Carbamoyl-phosphate synthase small chain; PFAM: Carbamoyl-phosphate synthase small chain, Glutamine amidotransferase type 1; SMART: Carbamoyl-phosphate synthase small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; KEGG: carA, putative carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (354 aa)
pyrCDihydroorotase multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (429 aa)
pyrBTIGRFAM: aspartate carbamoyltransferase; KEGG: pyrB, putative aspartate carbamoyltransferase; HAMAP : Aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein, aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (318 aa)
JBW_02850TIGRFAM: uracil-xanthine permease; KEGG: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease. (417 aa)
JBW_04057KEGG: ferredoxin-NADP reductase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein, Oxidoreductase FAD-binding domain protein. (278 aa)
JBW_04262Glutamate synthase (NADPH); PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: glutamate synthase (nadph) beta chain. (455 aa)
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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