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JBW_00069 JBW_00069 JBW_00099 JBW_00099 JBW_00116 JBW_00116 JBW_00245 JBW_00245 JBW_00478 JBW_00478 JBW_00828 JBW_00828 rhaD rhaD deoC deoC JBW_00979 JBW_00979 tal tal moaA moaA JBW_01093 JBW_01093 JBW_01250 JBW_01250 JBW_01384 JBW_01384 JBW_01387 JBW_01387 JBW_01413 JBW_01413 JBW_01519 JBW_01519 JBW_01520 JBW_01520 JBW_01642 JBW_01642 JBW_01677 JBW_01677 JBW_01688 JBW_01688 JBW_01690 JBW_01690 JBW_01698 JBW_01698 JBW_01700 JBW_01700 JBW_01783 JBW_01783 JBW_01797 JBW_01797 JBW_01798 JBW_01798 JBW_01803 JBW_01803 JBW_01807 JBW_01807 JBW_01811 JBW_01811 pckA pckA JBW_01951 JBW_01951 JBW_02073 JBW_02073 ribBA ribBA psd psd cobD cobD JBW_02515 JBW_02515 JBW_02570 JBW_02570 JBW_02571 JBW_02571 JBW_02617 JBW_02617 JBW_02618 JBW_02618 JBW_02623 JBW_02623 JBW_02688 JBW_02688 pckA-2 pckA-2 pyrF pyrF moaA-2 moaA-2 JBW_02821 JBW_02821 JBW_02867 JBW_02867 JBW_02897 JBW_02897 thiC thiC JBW_03089 JBW_03089 JBW_03109 JBW_03109 JBW_03136 JBW_03136 JBW_03253 JBW_03253 JBW_03295 JBW_03295 deoC-2 deoC-2 JBW_03456 JBW_03456 JBW_03484 JBW_03484 tpl tpl JBW_03927 JBW_03927 JBW_03987 JBW_03987 JBW_04082 JBW_04082 speD speD panD panD JBW_04284 JBW_04284 JBW_04285 JBW_04285 JBW_04291 JBW_04291 JBW_04294 JBW_04294 JBW_04347 JBW_04347 JBW_04348 JBW_04348 JBW_04366 JBW_04366 deoC-3 deoC-3 JBW_04521 JBW_04521 JBW_04522 JBW_04522
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
JBW_00069KEGG: acetoacetate decarboxylase; PFAM: Acetoacetate decarboxylase. (247 aa)
JBW_00099PFAM: ketose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolase; KEGG: ketose-bisphosphate aldolase. (277 aa)
JBW_00116Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). (376 aa)
JBW_00245PFAM: amidohydrolase 2; KEGG: putative metal-dependent hydrolase of the TIM-barrel fold protein. (329 aa)
JBW_00478KEGG: lysine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (383 aa)
JBW_00828TIGRFAM: 3-hexulose-6-phosphate synthase; KEGG: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase. (211 aa)
rhaDRhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (276 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (243 aa)
JBW_00979KEGG: transaldolase; PFAM: Transaldolase. (226 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (215 aa)
moaAMolybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (326 aa)
JBW_01093TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase type 1; KEGG: protein PabA. (191 aa)
JBW_01250PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal; KEGG: diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (422 aa)
JBW_01384KEGG: transaldolase; PFAM: Transaldolase. (225 aa)
JBW_01387Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit; Beta subunit of the biotin-dependent malonate decarboxylase multienzyme complex (EC 7.2.4.4). Acts as an integral membrane-bound carboxybiotin protein decarboxylase by releasing the carboxyl group of the carboxylated biotin carrier MADF. The free energy of the decarboxylation reaction is used to pump Na(+) out of the cell. (401 aa)
JBW_01413TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; KEGG: ketose-bisphosphate aldolase. (281 aa)
JBW_01519KEGG: Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (290 aa)
JBW_01520PFAM: Citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit; KEGG: citrate lyase subunit alpha. (513 aa)
JBW_01642KEGG: menaquinone biosynthesis decarboxylase, SCO4490 family; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family, UbiD family decarboxylase; PFAM: Carboxylyase-related protein; Belongs to the UbiD family. (486 aa)
JBW_01677Phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: aroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, chorismate mutase-isozyme 3; PFAM: DAHP synthetase I/KDSA, Chorismate mutase, type II; SMART: Chorismate mutase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase, chorismate mutase. (358 aa)
JBW_01688PFAM: sodium pump decarboxylase gamma subunit; KEGG: sodium pump decarboxylase subunit gamma. (118 aa)
JBW_01690Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). (373 aa)
JBW_01698Sodium pump decarboxylase gamma subunit; KEGG: putative Na+-transporting methylmalonyl-CoA decarboxylase subunit delta; PFAM: sodium pump decarboxylase gamma subunit. (118 aa)
JBW_01700Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD). (373 aa)
JBW_01783Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SMART: malic protein NAD-binding protein; PFAM: malic protein NAD-binding protein, malic protein domain protein; KEGG: sfcA, malate dehydrogenase. (410 aa)
JBW_01797Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. (293 aa)
JBW_01798KEGG: citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit. (513 aa)
JBW_01803PFAM: DAHP synthetase I/KDSA; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta. (337 aa)
JBW_01807KEGG: Indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase. (259 aa)
JBW_01811KEGG: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase type 1; TIGRFAM: glutamine amidotransferase of anthranilate synthase. (187 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (519 aa)
JBW_01951Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (119 aa)
JBW_02073Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (398 aa)
ribBA3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (402 aa)
psdPhosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (212 aa)
cobDCobalamin biosynthesis protein cbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (316 aa)
JBW_02515KEGG: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolase. (282 aa)
JBW_02570TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; KEGG: citrate lyase subunit alpha. (513 aa)
JBW_02571Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family. (289 aa)
JBW_02617KEGG: citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit. (513 aa)
JBW_02618KEGG: citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (293 aa)
JBW_02623KEGG: sfcA, malate dehydrogenase; SMART: malic protein NAD-binding protein; PFAM: malic protein NAD-binding protein, malic protein domain protein. (408 aa)
JBW_02688PFAM: alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; KEGG: AlsD, alpha-acetolactate decarboxylase. (258 aa)
pckA-2Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (525 aa)
pyrFOrotidine 5'-phosphate decarboxylase subfamily 1 core; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (239 aa)
moaA-2Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (323 aa)
JBW_02821KEGG: phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA. (338 aa)
JBW_02867KEGG: fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II, ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II. (309 aa)
JBW_02897PFAM: Protein of unknown function DUF3793; KEGG: hypothetical protein. (205 aa)
thiCPhosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. (432 aa)
JBW_03089PFAM: Transaldolase; KEGG: tal1, transaldolase. (225 aa)
JBW_03109PFAM: amidohydrolase 2; KEGG: amidohydrolase 2. (270 aa)
JBW_03136PFAM: ketose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolase; KEGG: Fructose-bisphosphate aldolase class II. (283 aa)
JBW_03253KEGG: tagatose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II. (284 aa)
JBW_03295PFAM: flavoprotein; KEGG: flavoprotein. (271 aa)
deoC-2Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (227 aa)
JBW_03456KEGG: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal. (427 aa)
JBW_03484TIGRFAM: Spore photoproduct lyase; KEGG: radical SAM protein; PFAM: Radical SAM domain protein. (342 aa)
tplHAMAP : Tyrosine phenol-lyase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tpl, tyrosine phenol-lyase; TIGRFAM: tyrosine phenol-lyase. (459 aa)
JBW_03927S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. (155 aa)
JBW_03987PFAM: Dimethylmenaquinone methyltransferase; KEGG: dimethylmenaquinone methyltransferase. (229 aa)
JBW_04082TIGRFAM: UbiD family decarboxylase; KEGG: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; Belongs to the UbiD family. (480 aa)
speDS-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily. (270 aa)
panDAspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (128 aa)
JBW_04284KEGG: citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit. (512 aa)
JBW_04285KEGG: Citrate lyase beta chain; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (295 aa)
JBW_04291TIGRFAM: carboxynorspermidine decarboxylase; KEGG: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal. (367 aa)
JBW_04294Tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tnaA, tryptophanase. (463 aa)
JBW_04347PFAM: ketose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolase; KEGG: hypothetical protein. (287 aa)
JBW_04348Ketose-bisphosphate aldolase; KEGG: iolJ, 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase IolJ; PFAM: ketose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolase. (284 aa)
JBW_04366KEGG: acetoacetate decarboxylase family protein; PFAM: Acetoacetate decarboxylase. (268 aa)
deoC-3Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (210 aa)
JBW_04521KEGG: citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit. (512 aa)
JBW_04522KEGG: citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (295 aa)
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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