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trpF | KEGG: phosphoribosylanthranilate isomerase; HAMAP : N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5 phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (185 aa) | ||||
JBW_01870 | KEGG: chaperonin Cpn60/TCP-1; PFAM: chaperonin Cpn60/TCP-1. (510 aa) | ||||
JBW_01912 | KEGG: chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class. (171 aa) | ||||
topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (729 aa) | ||||
JBW_02063 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (310 aa) | ||||
dapF | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (278 aa) | ||||
JBW_02089 | KEGG: ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (215 aa) | ||||
JBW_02251 | PFAM: 4-oxalocrotonate tautomerase; KEGG: 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme. (61 aa) | ||||
mtnA | Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (349 aa) | ||||
truB | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (292 aa) | ||||
JBW_02355 | KEGG: Precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH. (208 aa) | ||||
JBW_02364 | KEGG: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase. (303 aa) | ||||
fni | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (354 aa) | ||||
JBW_02392 | KEGG: pseudouridine synthase; TIGRFAM: pseudouridine synthase Rsu; SMART: RNA-binding S4 domain protein; PFAM: pseudouridine synthase, RNA-binding S4 domain protein; Belongs to the pseudouridine synthase RsuA family. (240 aa) | ||||
queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (339 aa) | ||||
deoB | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (394 aa) | ||||
JBW_02636 | KEGG: L-fucose isomerase family protein; PFAM: L-fucose isomerase-like protein. (493 aa) | ||||
araA | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (500 aa) | ||||
JBW_02638 | L-ribulose-5-phosphate 4-epimerase; KEGG: protein AraD; SMART: class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein. (231 aa) | ||||
JBW_02640 | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (346 aa) | ||||
JBW_02720 | TIGRFAM: lysine-2,3-aminomutase, lysine 2,3-aminomutase YodO family protein; PFAM: Lysine-2,3-aminomutase, C-terminal domain, Radical SAM domain protein; KEGG: lysine 2,3-aminomutase YodO family protein. (426 aa) | ||||
JBW_02826 | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (201 aa) | ||||
JBW_02866 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (294 aa) | ||||
hisA | 1-(5-phosphoribosyl)-5-(5- phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP : 1-(5-phosphoribosyl)-5-(5- phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein. (242 aa) | ||||
JBW_02940 | KEGG: hypothetical protein; PFAM: Domain of unknown function DUF1904. (108 aa) | ||||
JBW_02966 | D-lyxose ketol-isomerase; KEGG: sugar ABC transporter, auxiliary component. (175 aa) | ||||
purE | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (163 aa) | ||||
groL | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (549 aa) | ||||
rbsD | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa) | ||||
nnrE | ADP/ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to [...] (517 aa) | ||||
JBW_03050 | PFAM: 4-oxalocrotonate tautomerase; KEGG: 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme. (64 aa) | ||||
JBW_03251 | KEGG: aldose 1-epimerase; PFAM: Aldose 1-epimerase. (290 aa) | ||||
JBW_03252 | KEGG: hypothetical protein; PFAM: L-fucose isomerase-like protein. (448 aa) | ||||
JBW_03255 | KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2088. (490 aa) | ||||
JBW_03256 | KEGG: triosephosphate isomerase; PFAM: triosephosphate isomerase. (314 aa) | ||||
JBW_03321 | L-ribulose-5-phosphate 4-epimerase; SMART: class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; KEGG: L-ribulose 5-phosphate 4-epimerase. (231 aa) | ||||
JBW_03331 | TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family, ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: sugar-phosphate isomerase, RpiB/LacA/LacB family. (152 aa) | ||||
JBW_03333 | TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; KEGG: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (222 aa) | ||||
JBW_03437 | TIGRFAM: methylmalonyl-CoA mutase, large subunit, Methylmalonyl-CoA mutase domain-containing protein; PFAM: methylmalonyl-CoA mutase, cobalamin B12-binding domain protein; KEGG: methylmalonyl-CoA mutase large subunit; overlaps another CDS with the same product name. (728 aa) | ||||
JBW_03438 | TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: methylmalonyl-CoA mutase large subunit; overlaps another CDS with the same product name. (725 aa) | ||||
JBW_03458 | PFAM: Protein of unknown function DUF2088; KEGG: hypothetical protein. (431 aa) | ||||
pgl | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (243 aa) | ||||
JBW_03516 | KEGG: mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I. (306 aa) | ||||
JBW_03641 | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphomannomutase. (501 aa) | ||||
JBW_03758 | KEGG: aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase. (236 aa) | ||||
glmM | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (447 aa) | ||||
truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (244 aa) | ||||
JBW_04045 | TIGRFAM: aspartate racemase; KEGG: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family. (230 aa) | ||||
JBW_04109 | KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2088. (421 aa) | ||||
JBW_04249 | Phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; KEGG: pgm, phosphoglucomutase. (550 aa) | ||||
JBW_04407 | KEGG: putative mannose-6-phosphate isomerase, type I family protein; PFAM: mannose-6-phosphate isomerase type I. (321 aa) | ||||
JBW_04424 | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase; KEGG: algC, alginate biosynthesis protein AlgC. (457 aa) | ||||
hemL | KEGG: glutamate-1-semialdehyde-2,1-aminomutase; HAMAP : Glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase. (438 aa) | ||||
JBW_04519 | PFAM: PrpF protein; KEGG: PrpF protein. (385 aa) | ||||
JBW_04609 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (372 aa) | ||||
JBW_04635 | PFAM: NERD domain protein; KEGG: NERD domain-containing protein. (241 aa) | ||||
JBW_04752 | PFAM: class II aldolase/adducin family protein; SMART: class II aldolase/adducin family protein; KEGG: class II aldolase/adducin family protein. (215 aa) | ||||
gyrB | DNA gyrase B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (638 aa) | ||||
JBW_00014 | Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (143 aa) | ||||
gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (811 aa) | ||||
JBW_00187 | PFAM: Protein of unknown function DUF2088; KEGG: hypothetical protein. (411 aa) | ||||
JBW_00254 | PFAM: Ribose/galactose isomerase, Sugar-phosphate isomerase domain-containing protein; KEGG: hypothetical protein. (212 aa) | ||||
uxaC | HAMAP : Uronate isomerase; PFAM: Glucuronate isomerase; KEGG: glucuronate isomerase. (469 aa) | ||||
JBW_00449 | TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein, TOPRIM domain-containing protein, DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding protein, DNA topoisomerase I ATP-binding protein, TOPRIM domain-containing protein; KEGG: topB, putative DNA topoisomerase 3. (659 aa) | ||||
JBW_00538 | KEGG: ribose-5-phosphate isomerase B; TIGRFAM: ribose 5-phosphate isomerase B, sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase. (145 aa) | ||||
JBW_00564 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: putative UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (393 aa) | ||||
JBW_00651 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (177 aa) | ||||
JBW_00693 | UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: UDP-glucose 4-epimerase. (306 aa) | ||||
JBW_00695 | PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I. (460 aa) | ||||
pgi | PFAM: phosphoglucose isomerase (PGI); KEGG: pgi, putative glucose-6-phosphate isomerase; HAMAP : Glucose-6-phosphate isomerase; Belongs to the GPI family. (491 aa) | ||||
JBW_00827 | KEGG: mannose-6-phosphate isomerase. (315 aa) | ||||
JBW_00829 | TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: 6-phospho 3-hexuloisomerase. (185 aa) | ||||
tpiA | Triosephosphate isomerase, bacterial/eukaryotic; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (249 aa) | ||||
gpmI | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (512 aa) | ||||
rhaA | KEGG: L-rhamnose isomerase; PFAM: L-rhamnose isomerase; HAMAP : L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; Belongs to the rhamnose isomerase family. (417 aa) | ||||
JBW_00921 | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (104 aa) | ||||
murI | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (275 aa) | ||||
JBW_00964 | L-ribulose-5-phosphate 4-epimerase; KEGG: sugar-phosphate aldolase; SMART: class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein. (215 aa) | ||||
JBW_00980 | PFAM: Ribose/galactose isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: rpiB, ribose-5-phosphate isomerase B. (150 aa) | ||||
uxaC-2 | KEGG: glucuronate isomerase; HAMAP : Uronate isomerase; PFAM: Glucuronate isomerase. (466 aa) | ||||
JBW_01055 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (301 aa) | ||||
kduI | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (275 aa) | ||||
JBW_01090 | KEGG: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase, UDP-glucose 4-epimerase C-terminal domain; TIGRFAM: UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa) | ||||
topB | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] (730 aa) | ||||
JBW_01111 | TIGRFAM: aspartate racemase; KEGG: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; Belongs to the aspartate/glutamate racemases family. (238 aa) | ||||
nagB | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (250 aa) | ||||
xylA | KEGG: xylA, xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; HAMAP : Xylose isomerase; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family. (437 aa) | ||||
JBW_01417 | PFAM: KduI/IolB isomerase; KEGG: myo-inositol catabolism protein IolB. (262 aa) | ||||
JBW_01424 | PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: myo-inositol catabolism protein IolI. (277 aa) | ||||
murI-2 | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (270 aa) | ||||
glmS | Methylaspartate mutase S chain; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (138 aa) | ||||
JBW_01514 | KEGG: mutL2, glutamate mutase; TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; PFAM: Conserved hypothetical protein CHP01319, GlmL. (460 aa) | ||||
glmE | Methylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (484 aa) | ||||
JBW_01601 | KEGG: alanine racemase; PFAM: alanine racemase domain protein. (360 aa) | ||||
JBW_01603 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (358 aa) | ||||
tig | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (429 aa) | ||||
JBW_01649 | PFAM: alanine racemase domain protein; KEGG: alanine racemase domain-containing protein. (360 aa) | ||||
JBW_01656 | KEGG: D-ornithine 4,5-aminomutase E subunit; PFAM: D-Lysine 56-aminomutase alpha subunit, cobalamin B12-binding domain protein. (733 aa) | ||||
JBW_01657 | KEGG: methylaspartate mutase; TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; PFAM: Conserved hypothetical protein CHP01319, GlmL. (451 aa) | ||||
JBW_01671 | Isochorismate synthase; PFAM: Chorismate binding domain-containing protein; TIGRFAM: isochorismate synthase; KEGG: isochorismate synthase DhbC. (411 aa) | ||||
JBW_01694 | TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: methylmalonyl-CoA mutase large subunit. (548 aa) | ||||
JBW_01695 | Hypothetical protein; KEGG: icmB, putative isobutyryl-CoA mutase, small subunit. (130 aa) | ||||
JBW_01711 | TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: methylmalonyl-CoA mutase large subunit. (548 aa) | ||||
JBW_01712 | Hypothetical protein; KEGG: icmB, putative isobutyryl-CoA mutase, small subunit. (130 aa) | ||||
JBW_01714 | KEGG: methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase. (135 aa) | ||||
JBW_01790 | PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: hypothetical protein. (272 aa) |