STRINGSTRING
JBW_01646 JBW_01646 JBW_04057 JBW_04057 JBW_02393 JBW_02393 JBW_02791 JBW_02791 pyrK pyrK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JBW_01646PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein; KEGG: ferredoxin-NADP reductase. (284 aa)
JBW_04057KEGG: ferredoxin-NADP reductase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein, Oxidoreductase FAD-binding domain protein. (278 aa)
JBW_02393KEGG: hypothetical protein. (322 aa)
JBW_02791TIGRFAM: sulfite reductase, subunit B; KEGG: anaerobic sulfite reductase subunit B; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein, Oxidoreductase FAD-binding domain protein. (264 aa)
pyrKDihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (255 aa)
Your Current Organism:
Pelosinus fermentans
NCBI taxonomy Id: 1192197
Other names: P. fermentans JBW45, Pelosinus fermentans JBW45, Pelosinus fermentans str. JBW45, Pelosinus fermentans strain JBW45
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