STRINGSTRING
GCA_000277525_00410 GCA_000277525_00410 leuD leuD leuC leuC MBESOW_P2751 MBESOW_P2751 MBESOW_P3762 MBESOW_P3762 MBESOW_P1428 MBESOW_P1428 MBESOW_P2674 MBESOW_P2674 leuB leuB ilvD ilvD MBESOW_P3195 MBESOW_P3195 MBESOW_P1792 MBESOW_P1792 MBESOW_P1790 MBESOW_P1790 ilvC ilvC leuA leuA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000277525_00410Unannotated protein. (529 aa)
leuDUnannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (202 aa)
leuCUnannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (483 aa)
MBESOW_P2751Unannotated protein. (415 aa)
MBESOW_P3762Unannotated protein. (328 aa)
MBESOW_P1428Unannotated protein; Belongs to the IlvD/Edd family. (600 aa)
MBESOW_P2674Unannotated protein. (332 aa)
leuBUnannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (347 aa)
ilvDUnannotated protein; Belongs to the IlvD/Edd family. (615 aa)
MBESOW_P3195Unannotated protein. (363 aa)
MBESOW_P1792Unannotated protein. (583 aa)
MBESOW_P1790Unannotated protein. (171 aa)
ilvCUnannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (339 aa)
leuAUnannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (556 aa)
Your Current Organism:
Sphingobium xenophagum
NCBI taxonomy Id: 1192759
Other names: S. xenophagum QYY, Sphingobium xenophagum QYY, Sphingomonas xenophaga QYY
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