31 items (Leptospira borgpetersenii Pomona) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EMO61273.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (59 aa)
	EMO61282.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (199 aa)
	EMO61275.1	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (342 aa)
	EMO61258.1	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (100 aa)
	EMO61265.1	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (336 aa)
	EMO61292.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (105 aa)
	EMO61293.1	OmpA family protein. (661 aa)
	EMO63614.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (131 aa)
	EMO63588.1	OmpA family protein. (395 aa)
	EMO63594.1	ABC transporter, substrate-binding protein, family 3. (272 aa)
	EMO63612.1	Hypothetical protein. (524 aa)
	EMO65198.1	OmpA family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (658 aa)
	EMO63315.1	Hypothetical protein. (87 aa)
	EMO63337.1	Di-heme cytochrome C peroxidase. (316 aa)
	EMO61058.1	Hypothetical protein. (497 aa)
	EMO60391.1	OmpA family protein. (195 aa)
	EMO61487.1	Hypothetical protein. (111 aa)
	EMO61419.1	Putative EF-P lysine aminoacylase GenX; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the class-II aminoacyl-tRNA synthetase family. (315 aa)
	EMO61462.1	OmpA family protein. (378 aa)
	EMO60997.1	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative. (87 aa)
	EMO63003.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (313 aa)
	EMO63060.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (145 aa)
	EMO63023.1	Hypothetical protein; Identified by glimmer; putative. (61 aa)
	EMO62884.1	Tetratricopeptide repeat protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (2195 aa)
	EMO62880.1	WD40-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (392 aa)
	EMO62786.1	Putative lipoprotein. (206 aa)
	EMO62795.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (294 aa)
	EMO62892.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (556 aa)
	EMO62919.1	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. (119 aa)
	EMO62777.1	Glycosyltransferase, group 2 domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (332 aa)
	EMO62836.1	Putative membrane protein. (658 aa)

Your Current Organism:

Leptospira borgpetersenii Pomona

NCBI taxonomy Id: 1192866
Other names: L. borgpetersenii serovar Pomona str. 200901868, Leptospira borgpetersenii serovar Pomona str. 200901868

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EMO60391.1	EMO61293.1	LEP1GSC133_3182	LEP1GSC133_1315	OmpA family protein.	OmpA family protein.	0.837
EMO60391.1	EMO61462.1	LEP1GSC133_3182	LEP1GSC133_3365	OmpA family protein.	OmpA family protein.	0.551
EMO60391.1	EMO62880.1	LEP1GSC133_3182	LEP1GSC133_4256	OmpA family protein.	WD40-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.670
EMO60391.1	EMO62884.1	LEP1GSC133_3182	LEP1GSC133_4255	OmpA family protein.	Tetratricopeptide repeat protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.670
EMO60391.1	EMO63588.1	LEP1GSC133_3182	LEP1GSC133_1406	OmpA family protein.	OmpA family protein.	0.715
EMO60391.1	EMO65198.1	LEP1GSC133_3182	LEP1GSC133_1594	OmpA family protein.	OmpA family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.490
EMO61058.1	EMO61293.1	LEP1GSC133_2647	LEP1GSC133_1315	Hypothetical protein.	OmpA family protein.	0.909
EMO61058.1	EMO62880.1	LEP1GSC133_2647	LEP1GSC133_4256	Hypothetical protein.	WD40-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.709
EMO61058.1	EMO62884.1	LEP1GSC133_2647	LEP1GSC133_4255	Hypothetical protein.	Tetratricopeptide repeat protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.709
EMO61058.1	EMO63588.1	LEP1GSC133_2647	LEP1GSC133_1406	Hypothetical protein.	OmpA family protein.	0.909
EMO61258.1	EMO61265.1	LEP1GSC133_1294	LEP1GSC133_1295	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.795
EMO61258.1	EMO61275.1	LEP1GSC133_1294	LEP1GSC133_1293	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	0.994
EMO61258.1	EMO61282.1	LEP1GSC133_1294	LEP1GSC133_1291	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.540
EMO61258.1	EMO61292.1	LEP1GSC133_1294	LEP1GSC133_1296	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.795
EMO61265.1	EMO61258.1	LEP1GSC133_1295	LEP1GSC133_1294	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	0.795
EMO61265.1	EMO61273.1	LEP1GSC133_1295	LEP1GSC133_1290	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.424
EMO61265.1	EMO61275.1	LEP1GSC133_1295	LEP1GSC133_1293	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.	0.795
EMO61265.1	EMO61282.1	LEP1GSC133_1295	LEP1GSC133_1291	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.569
EMO61265.1	EMO61292.1	LEP1GSC133_1295	LEP1GSC133_1296	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.973
EMO61273.1	EMO61265.1	LEP1GSC133_1290	LEP1GSC133_1295	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	MATE efflux family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.424