(13 nodes) O-Antigen nucleotide sugar biosynthesis, and Galactose metabolism network (Bacillus mesonae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHR53_16145	Unannotated protein. (290 aa)
	CHR53_22840	Unannotated protein. (259 aa)
	CHR53_23655	Unannotated protein. (445 aa)
	galE	Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (323 aa)
	galU	Unannotated protein. (292 aa)
	galE-2	Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (335 aa)
	CHR53_24280	Unannotated protein. (446 aa)
	galU-2	Unannotated protein. (298 aa)
	galK	Unannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (393 aa)
	galT	Unannotated protein. (495 aa)
	CHR53_03910	Unannotated protein. (444 aa)
	galU-3	Unannotated protein. (295 aa)
	CHR53_11555	Unannotated protein. (338 aa)

Your Current Organism:

Bacillus mesonae

NCBI taxonomy Id: 1193713
Other names: B. mesonae, Bacillus mesonae Liu et al. 2014, Bacillus sp. FJAT-13985, CGMCC1.12238, DSM 25968, strain FJAT-13985

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHR53_03910	CHR53_11555	GCA_001636315_03299	GCA_001636315_04736	Unannotated protein.	Unannotated protein.	0.974
CHR53_03910	CHR53_23655	GCA_001636315_03299	GCA_001636315_01625	Unannotated protein.	Unannotated protein.	0.905
CHR53_03910	CHR53_24280	GCA_001636315_03299	GCA_001636315_01753	Unannotated protein.	Unannotated protein.	0.904
CHR53_03910	galE	GCA_001636315_03299	GCA_001636315_01653	Unannotated protein.	Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.918
CHR53_03910	galE-2	GCA_001636315_03299	GCA_001636315_01696	Unannotated protein.	Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.918
CHR53_03910	galT	GCA_001636315_03299	GCA_001636315_03260	Unannotated protein.	Unannotated protein.	0.800
CHR53_03910	galU	GCA_001636315_03299	GCA_001636315_01669	Unannotated protein.	Unannotated protein.	0.940
CHR53_03910	galU-2	GCA_001636315_03299	GCA_001636315_01754	Unannotated protein.	Unannotated protein.	0.940
CHR53_03910	galU-3	GCA_001636315_03299	GCA_001636315_04710	Unannotated protein.	Unannotated protein.	0.940
CHR53_11555	CHR53_03910	GCA_001636315_04736	GCA_001636315_03299	Unannotated protein.	Unannotated protein.	0.974
CHR53_11555	CHR53_23655	GCA_001636315_04736	GCA_001636315_01625	Unannotated protein.	Unannotated protein.	0.975
CHR53_11555	CHR53_24280	GCA_001636315_04736	GCA_001636315_01753	Unannotated protein.	Unannotated protein.	0.974
CHR53_11555	galU	GCA_001636315_04736	GCA_001636315_01669	Unannotated protein.	Unannotated protein.	0.824
CHR53_11555	galU-2	GCA_001636315_04736	GCA_001636315_01754	Unannotated protein.	Unannotated protein.	0.824
CHR53_11555	galU-3	GCA_001636315_04736	GCA_001636315_04710	Unannotated protein.	Unannotated protein.	0.824
CHR53_16145	CHR53_22840	GCA_001636315_00052	GCA_001636315_01466	Unannotated protein.	Unannotated protein.	0.591
CHR53_16145	galK	GCA_001636315_00052	GCA_001636315_03259	Unannotated protein.	Unannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.	0.884
CHR53_16145	galT	GCA_001636315_00052	GCA_001636315_03260	Unannotated protein.	Unannotated protein.	0.451
CHR53_22840	CHR53_16145	GCA_001636315_01466	GCA_001636315_00052	Unannotated protein.	Unannotated protein.	0.591
CHR53_22840	galE	GCA_001636315_01466	GCA_001636315_01653	Unannotated protein.	Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.866